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Protein

Uncharacterized ABC transporter ATP-binding protein YejF

Gene

yejF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi42 – 498ATP 1PROSITE-ProRule annotation
Nucleotide bindingi319 – 3268ATP 2PROSITE-ProRule annotation

GO - Molecular functioni

  • ATPase activity, coupled to transmembrane movement of substances Source: EcoCyc
  • ATP binding Source: UniProtKB-KW

GO - Biological processi

  • microcin transport Source: EcoCyc
Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:YEJF-MONOMER.
ECOL316407:JW2168-MONOMER.
RETL1328306-WGS:GSTH-186-MONOMER.
RETL1328306-WGS:GSTH-5942-MONOMER.

Protein family/group databases

TCDBi3.A.1.5.21. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized ABC transporter ATP-binding protein YejF
Gene namesi
Name:yejF
Ordered Locus Names:b2180, JW2168
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12041. yejF.

Subcellular locationi

GO - Cellular componenti

  • ATP-binding cassette (ABC) transporter complex Source: EcoCyc
  • plasma membrane Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 529529Uncharacterized ABC transporter ATP-binding protein YejFPRO_0000093168Add
BLAST

Proteomic databases

EPDiP33916.
PaxDbiP33916.
PRIDEiP33916.

Interactioni

Protein-protein interaction databases

BioGridi4260469. 13 interactions.
DIPiDIP-11936N.
IntActiP33916. 10 interactions.
MINTiMINT-1242905.
STRINGi511145.b2180.

Structurei

3D structure databases

ProteinModelPortaliP33916.
SMRiP33916. Positions 5-527.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 257252ABC transporter 1PROSITE-ProRule annotationAdd
BLAST
Domaini287 – 526240ABC transporter 2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated
Contains 2 ABC transporter domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4108JQ5. Bacteria.
COG4172. LUCA.
InParanoidiP33916.
KOiK13896.
OMAiWFPIRKG.
OrthoDBiEOG6T7N3V.
PhylomeDBiP33916.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR013563. Oligopep_ABC_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 2 hits.
PF08352. oligo_HPY. 2 hits.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS00211. ABC_TRANSPORTER_1. 2 hits.
PS50893. ABC_TRANSPORTER_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P33916-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQTLLAIEN LSVGFRHQQT VRTVVNDVSL QIEAGETLAL VGESGSGKSV
60 70 80 90 100
TALSILRLLP SPPVEYLSGD IRFHGESLLH ASDQTLRGVR GNKIAMIFQE
110 120 130 140 150
PMVSLNPLHT LEKQLYEVLS LHRGMRREAA RGEILNCLDR VGIRQAAKRL
160 170 180 190 200
TDYPHQLSGG ERQRVMIAMA LLTRPELLIA DEPTTALDVS VQAQILQLLR
210 220 230 240 250
ELQGELNMGM LFITHNLSIV RKLAHRVAVM QNGRCVEQNY AATLFASPTH
260 270 280 290 300
PYTQKLLNSE PSGDPVPLPE PASTLLDVEQ LQVAFPIRKG ILKRIVDHNV
310 320 330 340 350
VVKNISFTLR AGETLGLVGE SGSGKSTTGL ALLRLINSQG SIIFDGQPLQ
360 370 380 390 400
NLNRRQLLPI RHRIQVVFQD PNSSLNPRLN VLQIIEEGLR VHQPTLSAAQ
410 420 430 440 450
REQQVIAVMH EVGLDPETRH RYPAEFSGGQ RQRIAIARAL ILKPSLIILD
460 470 480 490 500
EPTSSLDKTV QAQILTLLKS LQQKHQLAYL FISHDLHVVR ALCHQVIILR
510 520
QGEVVEQGPC ARVFATPQQE YTRQLLALS
Length:529
Mass (Da):58,726
Last modified:February 1, 1994 - v1
Checksum:i5493631F83D2E336
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00008 Genomic DNA. Translation: AAA16379.1.
U00096 Genomic DNA. Translation: AAC75241.1.
AP009048 Genomic DNA. Translation: BAA15988.2.
PIRiC64987.
RefSeqiNP_416685.1. NC_000913.3.
WP_000194927.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75241; AAC75241; b2180.
BAA15988; BAA15988; BAA15988.
GeneIDi946689.
KEGGiecj:JW2168.
eco:b2180.
PATRICi32119715. VBIEscCol129921_2268.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00008 Genomic DNA. Translation: AAA16379.1.
U00096 Genomic DNA. Translation: AAC75241.1.
AP009048 Genomic DNA. Translation: BAA15988.2.
PIRiC64987.
RefSeqiNP_416685.1. NC_000913.3.
WP_000194927.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP33916.
SMRiP33916. Positions 5-527.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260469. 13 interactions.
DIPiDIP-11936N.
IntActiP33916. 10 interactions.
MINTiMINT-1242905.
STRINGi511145.b2180.

Protein family/group databases

TCDBi3.A.1.5.21. the atp-binding cassette (abc) superfamily.

Proteomic databases

EPDiP33916.
PaxDbiP33916.
PRIDEiP33916.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75241; AAC75241; b2180.
BAA15988; BAA15988; BAA15988.
GeneIDi946689.
KEGGiecj:JW2168.
eco:b2180.
PATRICi32119715. VBIEscCol129921_2268.

Organism-specific databases

EchoBASEiEB1975.
EcoGeneiEG12041. yejF.

Phylogenomic databases

eggNOGiENOG4108JQ5. Bacteria.
COG4172. LUCA.
InParanoidiP33916.
KOiK13896.
OMAiWFPIRKG.
OrthoDBiEOG6T7N3V.
PhylomeDBiP33916.

Enzyme and pathway databases

BioCyciEcoCyc:YEJF-MONOMER.
ECOL316407:JW2168-MONOMER.
RETL1328306-WGS:GSTH-186-MONOMER.
RETL1328306-WGS:GSTH-5942-MONOMER.

Miscellaneous databases

PROiP33916.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR013563. Oligopep_ABC_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 2 hits.
PF08352. oligo_HPY. 2 hits.
[Graphical view]
SMARTiSM00382. AAA. 2 hits.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 2 hits.
PROSITEiPS00211. ABC_TRANSPORTER_1. 2 hits.
PS50893. ABC_TRANSPORTER_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Automated multiplex sequencing of the E.coli genome."
    Richterich P., Lakey N., Gryan G., Jaehn L., Mintz L., Robison K., Church G.M.
    Submitted (OCT-1993) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / BHB2600.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 1-370.
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYEJF_ECOLI
AccessioniPrimary (citable) accession number: P33916
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: July 6, 2016
This is version 129 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.