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Protein

Inner membrane ABC transporter permease protein YejE

Gene

yejE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane.

GO - Molecular functioni

  • ATPase activity, coupled to movement of substances Source: EcoCyc

GO - Biological processi

  • microcin transport Source: EcoCyc
Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciEcoCyc:YEJE-MONOMER.
ECOL316407:JW2167-MONOMER.
RETL1328306-WGS:GSTH-185-MONOMER.

Protein family/group databases

TCDBi3.A.1.5.21. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane ABC transporter permease protein YejE
Gene namesi
Name:yejE
Ordered Locus Names:b2179, JW2167
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12040. yejE.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 2121CytoplasmicSequence analysisAdd
BLAST
Transmembranei22 – 4221HelicalPROSITE-ProRule annotationAdd
BLAST
Topological domaini43 – 143101PeriplasmicSequence analysisAdd
BLAST
Transmembranei144 – 16421HelicalPROSITE-ProRule annotationAdd
BLAST
Topological domaini165 – 17814CytoplasmicSequence analysisAdd
BLAST
Transmembranei179 – 19921HelicalPROSITE-ProRule annotationAdd
BLAST
Topological domaini200 – 2012PeriplasmicSequence analysis
Transmembranei202 – 22221HelicalPROSITE-ProRule annotationAdd
BLAST
Topological domaini223 – 25230CytoplasmicSequence analysisAdd
BLAST
Transmembranei253 – 27321HelicalPROSITE-ProRule annotationAdd
BLAST
Topological domaini274 – 30734PeriplasmicSequence analysisAdd
BLAST
Transmembranei308 – 32821HelicalPROSITE-ProRule annotationAdd
BLAST
Topological domaini329 – 34113CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

  • ATP-binding cassette (ABC) transporter complex Source: EcoCyc
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 341341Inner membrane ABC transporter permease protein YejEPRO_0000060259Add
BLAST

Proteomic databases

PaxDbiP33915.
PRIDEiP33915.

Interactioni

Protein-protein interaction databases

DIPiDIP-11935N.
IntActiP33915. 1 interaction.
STRINGi511145.b2179.

Structurei

3D structure databases

ProteinModelPortaliP33915.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini140 – 332193ABC transmembrane type-1PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 ABC transmembrane type-1 domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108IYQ. Bacteria.
COG4239. LUCA.
HOGENOMiHOG000171366.
InParanoidiP33915.
KOiK13895.
OMAiPSPPTWM.
OrthoDBiEOG6T7N3V.
PhylomeDBiP33915.

Family and domain databases

Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
IPR025966. OppC_N.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
PF12911. OppC_N. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P33915-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRLSPVNQA RWARFRHNRR GYWSLWIFLV LFGLSLCSEL IANDKPLLVR
60 70 80 90 100
YDGSWYFPLL KNYSESDFGG PLASQADYQD PWLKQRLENN GWVLWAPIRF
110 120 130 140 150
GATSINFATN KPFPSPPSRQ NWLGTDANGG DVLARILYGT RISVLFGLML
160 170 180 190 200
TLCSSVMGVL AGALQGYYGG KVDLWGQRFI EVWSGMPTLF LIILLSSVVQ
210 220 230 240 250
PNFWWLLAIT VLFGWMSLVG VVRAEFLRTR NFDYIRAAQA LGVSDRSIIL
260 270 280 290 300
RHMLPNAMVA TLTFLPFILC SSITTLTSLD FLGFGLPLGS PSLGELLLQG
310 320 330 340
KNNLQAPWLG ITAFLSVAIL LSLLIFIGEA VRDAFDPNKA V
Length:341
Mass (Da):38,092
Last modified:February 1, 1994 - v1
Checksum:i3F86F7B0EF8E6C70
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00008 Genomic DNA. Translation: AAA16378.1.
U00096 Genomic DNA. Translation: AAC75240.1.
AP009048 Genomic DNA. Translation: BAA15987.1.
PIRiB64987.
RefSeqiNP_416684.1. NC_000913.3.
WP_000088923.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75240; AAC75240; b2179.
BAA15987; BAA15987; BAA15987.
GeneIDi946683.
KEGGiecj:JW2167.
eco:b2179.
PATRICi32119713. VBIEscCol129921_2267.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00008 Genomic DNA. Translation: AAA16378.1.
U00096 Genomic DNA. Translation: AAC75240.1.
AP009048 Genomic DNA. Translation: BAA15987.1.
PIRiB64987.
RefSeqiNP_416684.1. NC_000913.3.
WP_000088923.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP33915.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-11935N.
IntActiP33915. 1 interaction.
STRINGi511145.b2179.

Protein family/group databases

TCDBi3.A.1.5.21. the atp-binding cassette (abc) superfamily.

Proteomic databases

PaxDbiP33915.
PRIDEiP33915.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75240; AAC75240; b2179.
BAA15987; BAA15987; BAA15987.
GeneIDi946683.
KEGGiecj:JW2167.
eco:b2179.
PATRICi32119713. VBIEscCol129921_2267.

Organism-specific databases

EchoBASEiEB1974.
EcoGeneiEG12040. yejE.

Phylogenomic databases

eggNOGiENOG4108IYQ. Bacteria.
COG4239. LUCA.
HOGENOMiHOG000171366.
InParanoidiP33915.
KOiK13895.
OMAiPSPPTWM.
OrthoDBiEOG6T7N3V.
PhylomeDBiP33915.

Enzyme and pathway databases

BioCyciEcoCyc:YEJE-MONOMER.
ECOL316407:JW2167-MONOMER.
RETL1328306-WGS:GSTH-185-MONOMER.

Miscellaneous databases

PROiP33915.

Family and domain databases

Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
IPR025966. OppC_N.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
PF12911. OppC_N. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Automated multiplex sequencing of the E.coli genome."
    Richterich P., Lakey N., Gryan G., Jaehn L., Mintz L., Robison K., Church G.M.
    Submitted (OCT-1993) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / BHB2600.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  5. "Global topology analysis of the Escherichia coli inner membrane proteome."
    Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.
    Science 308:1321-1323(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
    Strain: K12 / MG1655 / ATCC 47076.

Entry informationi

Entry nameiYEJE_ECOLI
AccessioniPrimary (citable) accession number: P33915
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: November 11, 2015
This is version 124 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.