Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized protein YbbC

Gene

ybbC

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11769-MONOMER.
ECOL316407:JW0487-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbbC
Gene namesi
Name:ybbC
Ordered Locus Names:b0498, JW0487
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11769. ybbC.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717PROSITE-ProRule annotationAdd
BLAST
Chaini18 – 122105Uncharacterized protein YbbCPRO_0000013796Add
BLAST

Proteomic databases

PaxDbiP33668.

Expressioni

Inductioni

Repressed by H-NS, induced by LeuO. Part of the rhsD-ybbC operon.1 Publication

Interactioni

Protein-protein interaction databases

BioGridi4259866. 252 interactions.
DIPiDIP-11316N.
IntActiP33668. 3 interactions.
STRINGi511145.b0498.

Structurei

3D structure databases

ProteinModelPortaliP33668.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

OrthoDBiEOG6BKJB2.

Family and domain databases

InterProiIPR028921. NTF2_fold_dom.
[Graphical view]
PfamiPF15631. Imm-NTF2-2. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P33668-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYSSIFSML SFFILFACNE TAVYGSDENI IFMRYVEKLH LDKYSVKNTV
60 70 80 90 100
KTETMAIQLA EIYVRYRYGE RIAEEEKPYL ITELPDSWVV EGAKLPYEVA
110 120
GGVFIIEINK KNGCVLNFLH SK
Length:122
Mass (Da):14,152
Last modified:February 1, 1994 - v1
Checksum:i8495943E141EF426
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X60999 Genomic DNA. Translation: CAA43315.1.
U82664 Genomic DNA. Translation: AAB40252.1.
U00096 Genomic DNA. Translation: AAC73600.1.
AP009048 Genomic DNA. Translation: BAE76277.1.
PIRiA64781.
RefSeqiNP_415031.1. NC_000913.3.
WP_000877768.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73600; AAC73600; b0498.
BAE76277; BAE76277; BAE76277.
GeneIDi945115.
KEGGiecj:JW0487.
eco:b0498.
PATRICi32116155. VBIEscCol129921_0519.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X60999 Genomic DNA. Translation: CAA43315.1.
U82664 Genomic DNA. Translation: AAB40252.1.
U00096 Genomic DNA. Translation: AAC73600.1.
AP009048 Genomic DNA. Translation: BAE76277.1.
PIRiA64781.
RefSeqiNP_415031.1. NC_000913.3.
WP_000877768.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP33668.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259866. 252 interactions.
DIPiDIP-11316N.
IntActiP33668. 3 interactions.
STRINGi511145.b0498.

Proteomic databases

PaxDbiP33668.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73600; AAC73600; b0498.
BAE76277; BAE76277; BAE76277.
GeneIDi945115.
KEGGiecj:JW0487.
eco:b0498.
PATRICi32116155. VBIEscCol129921_0519.

Organism-specific databases

EchoBASEiEB1719.
EcoGeneiEG11769. ybbC.

Phylogenomic databases

OrthoDBiEOG6BKJB2.

Enzyme and pathway databases

BioCyciEcoCyc:EG11769-MONOMER.
ECOL316407:JW0487-MONOMER.

Miscellaneous databases

PROiP33668.

Family and domain databases

InterProiIPR028921. NTF2_fold_dom.
[Graphical view]
PfamiPF15631. Imm-NTF2-2. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The RhsD-E subfamily of Escherichia coli K-12."
    Sadosky A.B., Gray J.A., Hill C.W.
    Nucleic Acids Res. 19:7177-7183(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. "Sequence of minutes 4-25 of Escherichia coli."
    Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M., Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D., Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.
    Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  5. "Involvement of the leucine response transcription factor LeuO in regulation of the genes for sulfa drug efflux."
    Shimada T., Yamamoto K., Ishihama A.
    J. Bacteriol. 191:4562-4571(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: OPERON STRUCTURE, INDUCTION.
    Strain: K12 / BW25113.

Entry informationi

Entry nameiYBBC_ECOLI
AccessioniPrimary (citable) accession number: P33668
Secondary accession number(s): Q2MBS9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: January 20, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.