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Protein

Inner membrane protein YohD

Gene

yohD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • FtsZ-dependent cytokinesis Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:EG12017-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YohD
Gene namesi
Name:yohD
Ordered Locus Names:b2136, JW2124
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12017 yohD

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 40PeriplasmicSequence analysisAdd BLAST40
Transmembranei41 – 61HelicalSequence analysisAdd BLAST21
Topological domaini62 – 121CytoplasmicSequence analysisAdd BLAST60
Transmembranei122 – 142HelicalSequence analysisAdd BLAST21
Topological domaini143 – 159PeriplasmicSequence analysisAdd BLAST17
Transmembranei160 – 180HelicalSequence analysisAdd BLAST21
Topological domaini181 – 192CytoplasmicSequence analysisAdd BLAST12

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001614161 – 192Inner membrane protein YohDAdd BLAST192

Proteomic databases

PaxDbiP33366
PRIDEiP33366

Interactioni

Protein-protein interaction databases

BioGridi4259177, 87 interactors
DIPiDIP-12805N
IntActiP33366, 1 interactor
STRINGi316385.ECDH10B_2292

Structurei

3D structure databases

ProteinModelPortaliP33366
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the DedA family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105KHU Bacteria
COG0586 LUCA
HOGENOMiHOG000105365
InParanoidiP33366
OMAiFMYGFRI
PhylomeDBiP33366

Family and domain databases

InterProiView protein in InterPro
IPR032816 SNARE_assoc
PfamiView protein in Pfam
PF09335 SNARE_assoc, 1 hit

Sequencei

Sequence statusi: Complete.

P33366-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLNTLISQY GYAALVIGSL AEGETVTLLG GVAAHQGLLK FPLVVLSVAL
60 70 80 90 100
GGMIGDQVLY LCGRRFGGKL LRRFSKHQDK IERAQKLIQR HPYLFVIGTR
110 120 130 140 150
FMYGFRVIGP TLIGASQLPP KIFLPLNILG AFAWALIFTT IGYAGGQVIA
160 170 180 190
PWLHNLDQHL KHWVWLILVV VLVVGVRWWL KRRGKKKPDH QA
Length:192
Mass (Da):21,445
Last modified:February 1, 1994 - v1
Checksum:i562347F6A127825F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00007 Genomic DNA Translation: AAA60498.1
U00096 Genomic DNA Translation: AAC75197.2
AP009048 Genomic DNA Translation: BAE76613.1
PIRiG64981
RefSeqiNP_416640.2, NC_000913.3
WP_001296821.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75197; AAC75197; b2136
BAE76613; BAE76613; BAE76613
GeneIDi946661
KEGGiecj:JW2124
eco:b2136
PATRICifig|1411691.4.peg.106

Similar proteinsi

Entry informationi

Entry nameiYOHD_ECOLI
AccessioniPrimary (citable) accession number: P33366
Secondary accession number(s): P76436, Q2MAU3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: March 28, 2018
This is version 119 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health