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Protein

Uncharacterized lipoprotein YehR

Gene

yehR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12004-MONOMER.
ECOL316407:JW5351-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized lipoprotein YehR
Gene namesi
Name:yehR
Ordered Locus Names:b2123, JW5351
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12004. yehR.

Subcellular locationi

  • Cell membrane PROSITE-ProRule annotation; Lipid-anchor PROSITE-ProRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222PROSITE-ProRule annotationAdd
BLAST
Chaini23 – 153131Uncharacterized lipoprotein YehRPRO_0000018041Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi23 – 231N-palmitoyl cysteinePROSITE-ProRule annotation
Lipidationi23 – 231S-diacylglycerol cysteinePROSITE-ProRule annotation

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

PaxDbiP33354.

Interactioni

Protein-protein interaction databases

BioGridi4261867. 6 interactions.
IntActiP33354. 6 interactions.
STRINGi511145.b2123.

Structurei

Secondary structure

1
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi28 – 369Combined sources
Beta strandi39 – 4810Combined sources
Beta strandi51 – 6212Combined sources
Turni63 – 653Combined sources
Helixi71 – 8212Combined sources
Turni83 – 875Combined sources
Beta strandi88 – 903Combined sources
Beta strandi92 – 976Combined sources
Beta strandi99 – 10911Combined sources
Helixi115 – 1184Combined sources
Turni119 – 1224Combined sources
Helixi128 – 1336Combined sources
Helixi137 – 14610Combined sources
Beta strandi151 – 1533Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2JOENMR-A24-153[»]
ProteinModelPortaliP33354.
SMRiP33354. Positions 24-153.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP33354.

Family & Domainsi

Sequence similaritiesi

To L.monocytogenes lmo0207.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108YCW. Bacteria.
COG4808. LUCA.
HOGENOMiHOG000122211.
OMAiTHEIDYQ.
OrthoDBiEOG67MF7V.

Family and domain databases

Gene3Di3.30.1830.10. 1 hit.
InterProiIPR009736. DUF1307.
[Graphical view]
PfamiPF06998. DUF1307. 1 hit.
[Graphical view]
PIRSFiPIRSF006187. DUF1307. 1 hit.
SUPFAMiSSF160704. SSF160704. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P33354-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAFNKLFSL VVASVLVFSL AGCGDKEESK KFSANLNGTE IAITYVYKGD
60 70 80 90 100
KVLKQSSETK IQFASIGATT KEDAAKTLEP LSAKYKNIAG VEEKLTYTDT
110 120 130 140 150
YAQENVTIDM EKVDFKALQG ISGINVSAED AKKGITMAQM ELVMKAAGFK

EVK
Length:153
Mass (Da):16,594
Last modified:July 15, 1998 - v2
Checksum:i5804CA5148F5191B
GO

Sequence cautioni

The sequence AAA60486.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00007 Genomic DNA. Translation: AAA60486.1. Different initiation.
U00096 Genomic DNA. Translation: AAC75184.2.
AP009048 Genomic DNA. Translation: BAE76599.1.
RefSeqiNP_416627.2. NC_000913.3.
WP_001295429.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75184; AAC75184; b2123.
BAE76599; BAE76599; BAE76599.
GeneIDi949023.
KEGGiecj:JW5351.
eco:b2123.
PATRICi32119583. VBIEscCol129921_2202.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00007 Genomic DNA. Translation: AAA60486.1. Different initiation.
U00096 Genomic DNA. Translation: AAC75184.2.
AP009048 Genomic DNA. Translation: BAE76599.1.
RefSeqiNP_416627.2. NC_000913.3.
WP_001295429.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2JOENMR-A24-153[»]
ProteinModelPortaliP33354.
SMRiP33354. Positions 24-153.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261867. 6 interactions.
IntActiP33354. 6 interactions.
STRINGi511145.b2123.

Proteomic databases

PaxDbiP33354.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75184; AAC75184; b2123.
BAE76599; BAE76599; BAE76599.
GeneIDi949023.
KEGGiecj:JW5351.
eco:b2123.
PATRICi32119583. VBIEscCol129921_2202.

Organism-specific databases

EchoBASEiEB1942.
EcoGeneiEG12004. yehR.

Phylogenomic databases

eggNOGiENOG4108YCW. Bacteria.
COG4808. LUCA.
HOGENOMiHOG000122211.
OMAiTHEIDYQ.
OrthoDBiEOG67MF7V.

Enzyme and pathway databases

BioCyciEcoCyc:EG12004-MONOMER.
ECOL316407:JW5351-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP33354.
PROiP33354.

Family and domain databases

Gene3Di3.30.1830.10. 1 hit.
InterProiIPR009736. DUF1307.
[Graphical view]
PfamiPF06998. DUF1307. 1 hit.
[Graphical view]
PIRSFiPIRSF006187. DUF1307. 1 hit.
SUPFAMiSSF160704. SSF160704. 1 hit.
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Automated multiplex sequencing of the E.coli genome."
    Richterich P., Lakey N., Gryan G., Jaehn L., Mintz L., Robison K., Church G.M.
    Submitted (OCT-1993) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / BHB2600.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "NMR structure of E.coli yehR protein."
    Northeast structural genomics consortium (NESG)
    Submitted (MAR-2007) to the PDB data bank
    Cited for: STRUCTURE BY NMR OF 24-153.

Entry informationi

Entry nameiYEHR_ECOLI
AccessioniPrimary (citable) accession number: P33354
Secondary accession number(s): Q2MAV7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: July 15, 1998
Last modified: January 20, 2016
This is version 113 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.