Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

HTH-type transcriptional regulator AdiY

Gene

adiY

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi165 – 184H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciEcoCyc:EG11966-MONOMER.
ECOL316407:JW4077-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator AdiY
Gene namesi
Name:adiY
Ordered Locus Names:b4116, JW4077
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11966. adiY.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001944951 – 253HTH-type transcriptional regulator AdiYAdd BLAST253

Proteomic databases

PaxDbiP33234.
PRIDEiP33234.

Interactioni

Protein-protein interaction databases

BioGridi4263080. 2 interactors.
IntActiP33234. 2 interactors.
STRINGi511145.b4116.

Structurei

3D structure databases

ProteinModelPortaliP33234.
SMRiP33234.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH araC/xylS-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4106ZGR. Bacteria.
ENOG4110B0F. LUCA.
HOGENOMiHOG000127052.
InParanoidiP33234.
KOiK03755.
OMAiSDIHKEW.
PhylomeDBiP33234.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR018062. HTH_AraC-typ_CS.
IPR020449. Tscrpt_reg_HTH_AraC-type.
[Graphical view]
PfamiPF12833. HTH_18. 1 hit.
[Graphical view]
PRINTSiPR00032. HTHARAC.
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00041. HTH_ARAC_FAMILY_1. 1 hit.
PS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P33234-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRICSDQPCI VLLTEKDVWI RVNGKEPISL KANHMALLNC ENNIIDVSSL
60 70 80 90 100
NNTLVAHISH DIIKDYLRFL NKDLSQIPVW QRSATPILTL PCLTPDVFRV
110 120 130 140 150
AAQHSMMPAE TESEKERTRA LLFTVLSRFL DSKKFVSLMM YMLRNCVSDS
160 170 180 190 200
VYQIIESDIH KDWNLSMVAS CLCLSPSLLK KKLKSENTSY SQIITTCRMR
210 220 230 240 250
YAVNELMMDG KNISQVSQSC GYNSTSYFIS VFKDFYGMTP LHYVSQHRER

TVA
Length:253
Mass (Da):29,007
Last modified:February 1, 1994 - v1
Checksum:i6A7DE2B06E60389E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U02384 Unassigned DNA. Translation: AAB18143.1.
U14003 Genomic DNA. Translation: AAA97016.1.
U00096 Genomic DNA. Translation: AAC77077.1.
AP009048 Genomic DNA. Translation: BAE78118.1.
PIRiS56345.
RefSeqiNP_418540.1. NC_000913.3.
WP_001217060.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77077; AAC77077; b4116.
BAE78118; BAE78118; BAE78118.
GeneIDi948627.
KEGGiecj:JW4077.
eco:b4116.
PATRICi32123797. VBIEscCol129921_4247.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U02384 Unassigned DNA. Translation: AAB18143.1.
U14003 Genomic DNA. Translation: AAA97016.1.
U00096 Genomic DNA. Translation: AAC77077.1.
AP009048 Genomic DNA. Translation: BAE78118.1.
PIRiS56345.
RefSeqiNP_418540.1. NC_000913.3.
WP_001217060.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP33234.
SMRiP33234.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263080. 2 interactors.
IntActiP33234. 2 interactors.
STRINGi511145.b4116.

Proteomic databases

PaxDbiP33234.
PRIDEiP33234.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77077; AAC77077; b4116.
BAE78118; BAE78118; BAE78118.
GeneIDi948627.
KEGGiecj:JW4077.
eco:b4116.
PATRICi32123797. VBIEscCol129921_4247.

Organism-specific databases

EchoBASEiEB1909.
EcoGeneiEG11966. adiY.

Phylogenomic databases

eggNOGiENOG4106ZGR. Bacteria.
ENOG4110B0F. LUCA.
HOGENOMiHOG000127052.
InParanoidiP33234.
KOiK03755.
OMAiSDIHKEW.
PhylomeDBiP33234.

Enzyme and pathway databases

BioCyciEcoCyc:EG11966-MONOMER.
ECOL316407:JW4077-MONOMER.

Miscellaneous databases

PROiP33234.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR018062. HTH_AraC-typ_CS.
IPR020449. Tscrpt_reg_HTH_AraC-type.
[Graphical view]
PfamiPF12833. HTH_18. 1 hit.
[Graphical view]
PRINTSiPR00032. HTHARAC.
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00041. HTH_ARAC_FAMILY_1. 1 hit.
PS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiADIY_ECOLI
AccessioniPrimary (citable) accession number: P33234
Secondary accession number(s): Q2M6I8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: November 2, 2016
This is version 121 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.