P33229 (RALR_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Restriction alleviation and modification enhancement protein

Gene names

Name:	ralR
Synonyms:	lar, ral, ydaB
Ordered Locus Names:	b1348, JW5208

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	64 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Function	Has a RAL-like activity.
Miscellaneous	This protein is encoded on Rac prophage.
Sequence similarities	To phage lambda, P22, and phi-21 ral.
Sequence caution	The sequence AAA16180.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Ontologies

Keywords
Biological process	Restriction system
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA restriction-modification system Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 64	64	Restriction alleviation and modification enhancement protein		PRO_0000084360

Sequences

	Sequence		Length	Mass (Da)
	P33229 [UniParc]. Last modified November 1, 1995. Version 2. Checksum: 0D84834187B22F59	FASTA	64	7,019
	10 20 30 40 50 60 MRYDNVKPCP FCGCPSVTVK AISGYYRAKC NGCESRTGYG GSEKEALERW NKRTTGNNNG GVHV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genetic and molecular analyses of the C-terminal region of the recE gene from the Rac prophage of Escherichia coli K-12 reveal the recT gene." Clark A.J., Sharma V., Brenowitz S., Chu C.C., Sandler S.J., Satin L., Templin A., Berger I., Cohen A. J. Bacteriol. 175:7673-7682(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: K12.
[2]	"A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map." Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T., Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K., Miki T., Mizobuchi K., Mori H., Mori T., Motomura K. , Nakade S., Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G., Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y., Wada C., Yamamoto Y., Horiuchi T. DNA Res. 3:363-377(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[4]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[5]	"Restriction alleviation and modification enhancement by the Rac prophage of Escherichia coli K-12." King G., Murray N.E. Mol. Microbiol. 16:769-777(1995) [PubMed] [Europe PMC] [Abstract] Cited for: CHARACTERIZATION.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	L23927 Unassigned DNA. Translation: AAA16180.1. Different initiation. U00096 Genomic DNA. Translation: AAC74430.1. AP009048 Genomic DNA. Translation: BAA14948.1.
PIR	G64884.
RefSeq	NP_415864.1. NC_000913.2. YP_489618.1. NC_007779.1.
3D structure databases
ProteinModelPortal	P33229.
ModBase	Search...
Protein-protein interaction databases
STRING	511145.b1348.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC74430; AAC74430; b1348. BAA14948; BAA14948; BAA14948.
GeneID	12932592. 945914.
KEGG	ecj:Y75_p1325. eco:b1348.
Organism-specific databases
EchoBASE	EB1845.
EcoGene	EG11900. ralR.
Phylogenomic databases
eggNOG	NOG13095.
HOGENOM	HOG000054869.
OMA	MRYEKVK.
ProtClustDB	PRK09710.
Enzyme and pathway databases
BioCyc	EcoCyc:EG11900-MONOMER. ECOL316407:JW5208-MONOMER.
Gene expression databases
Genevestigator	P33229.
Family and domain databases
InterPro	IPR019908. Restrct_alleviation_prot_Lar. [Graphical view]
TIGRFAMs	TIGR03655. anti_R_Lar. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RALR_ECOLI

Accession

Primary (citable) accession number: P33229

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 1, 1994
Last sequence update:	November 1, 1995
Last modified:	May 1, 2013
This is version 80 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program