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Protein

Putative protein StfE

Gene

stfE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6599-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative protein StfE
Alternative name(s):
Side tail fiber protein homolog from lambdoid prophage e14
Gene namesi
Name:stfE
Ordered Locus Names:b1157, JW5172
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11818. stfE.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini‹1 – 166›166Putative protein StfEPRO_0000077741Add
BLAST

Proteomic databases

PRIDEiP33227.

Structurei

3D structure databases

ProteinModelPortaliP33227.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the tail fiber family.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

HOGENOMiHOG000118659.

Family and domain databases

Gene3Di3.90.1340.10. 1 hit.
InterProiIPR011083. Phage_tail_collar_dom.
[Graphical view]
PfamiPF07484. Collar. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

P33227-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
VGLGEGSALP VGVPVPWPSA TPPTGWLKCN GAAFSAEEYP ELAKAYPTNK
60 70 80 90 100
LPDLRGEFIR GWDDGRGIDT GRSILSIQGY ATEDHAHGLP SRSTIVTDAT
110 120 130 140 150
INFYFDEIWV NSGTDIIKRG NTNDAGLPAP DYGTFKTYKQ SVDGLGAAAS
160
ETRPRNIAFN YIVRAA
Length:166
Mass (Da):17,789
Last modified:December 1, 2000 - v2
Checksum:iE8E7397D2E86C7E3
GO

Sequence cautioni

The sequence X01805 differs from that shown. Reason: Frameshift at position 152. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X01805 Genomic DNA. No translation available.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.
PIRiB64861.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X01805 Genomic DNA. No translation available.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.
PIRiB64861.

3D structure databases

ProteinModelPortaliP33227.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiP33227.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

EchoBASEiEB1765.
EcoGeneiEG11818. stfE.

Phylogenomic databases

HOGENOMiHOG000118659.

Enzyme and pathway databases

BioCyciEcoCyc:G6599-MONOMER.

Family and domain databases

Gene3Di3.90.1340.10. 1 hit.
InterProiIPR011083. Phage_tail_collar_dom.
[Graphical view]
PfamiPF07484. Collar. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSTFE_ECOLI
AccessioniPrimary (citable) accession number: P33227
Secondary accession number(s): P75986
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: December 1, 2000
Last modified: November 11, 2015
This is version 90 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.