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Protein

Pathogenesis-related protein 1

Gene

At2g14610

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Partially responsible for acquired pathogen resistance.

GO - Biological processi

  • defense response Source: TAIR
  • response to vitamin B1 Source: TAIR
  • response to water deprivation Source: TAIR
  • systemic acquired resistance Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Pathogenesis-related protein

Keywords - Biological processi

Plant defense

Names & Taxonomyi

Protein namesi
Recommended name:
Pathogenesis-related protein 1
Short name:
PR-1
Gene namesi
Ordered Locus Names:At2g14610
ORF Names:T6B13.15
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G14610.

Subcellular locationi

GO - Cellular componenti

  • apoplast Source: UniProtKB-SubCell
  • cell wall Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Apoplast, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626Sequence analysisAdd
BLAST
Chaini27 – 161135Pathogenesis-related protein 1PRO_0000006304Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi70 ↔ 138By similarity
Disulfide bondi113 ↔ 117By similarity
Disulfide bondi133 ↔ 147By similarity

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiP33154.
PRIDEiP33154.

Expressioni

Inductioni

By 2,6-dichloroisonicotinic acid (INA) and salicylic acid (possibly an endogenous signal for acquired resistance). Strongly induced by pathogen infection.

Gene expression databases

GenevisibleiP33154. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G14610.1.

Structurei

3D structure databases

ProteinModelPortaliP33154.
SMRiP33154. Positions 27-161.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini34 – 149116SCPAdd
BLAST

Sequence similaritiesi

Belongs to the CRISP family.Curated
Contains 1 SCP domain.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG3017. Eukaryota.
COG2340. LUCA.
InParanoidiP33154.
KOiK13449.
OMAiSAAINEW.
PhylomeDBiP33154.

Family and domain databases

Gene3Di3.40.33.10. 1 hit.
InterProiIPR001283. Allrgn_V5/Tpx1.
IPR018244. Allrgn_V5/Tpx1_CS.
IPR014044. CAP_domain.
[Graphical view]
PfamiPF00188. CAP. 1 hit.
[Graphical view]
PRINTSiPR00837. V5TPXLIKE.
SMARTiSM00198. SCP. 1 hit.
[Graphical view]
SUPFAMiSSF55797. SSF55797. 1 hit.
PROSITEiPS01009. CRISP_1. 1 hit.
PS01010. CRISP_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P33154-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNFTGYSRFL IVFVALVGAL VLPSKAQDSP QDYLRVHNQA RGAVGVGPMQ
60 70 80 90 100
WDERVAAYAR SYAEQLRGNC RLIHSGGPYG ENLAWGSGDL SGVSAVNMWV
110 120 130 140 150
SEKANYNYAA NTCNGVCGHY TQVVWRKSVR LGCAKVRCNN GGTIISCNYD
160
PRGNYVNEKP Y
Length:161
Mass (Da):17,677
Last modified:October 1, 1993 - v1
Checksum:i898B0FF6547C3F84
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M90508 mRNA. Translation: AAA32863.1.
AC005398 Genomic DNA. Translation: AAC69381.1.
CP002685 Genomic DNA. Translation: AEC06314.1.
DQ446496 Genomic DNA. Translation: ABE65442.1.
AY064023 mRNA. Translation: AAL36379.1.
AY117187 mRNA. Translation: AAM51262.1.
PIRiJQ1693.
RefSeqiNP_179068.1. NM_127025.2.
UniGeneiAt.321.
At.74123.

Genome annotation databases

EnsemblPlantsiAT2G14610.1; AT2G14610.1; AT2G14610.
GeneIDi815949.
GrameneiAT2G14610.1; AT2G14610.1; AT2G14610.
KEGGiath:AT2G14610.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M90508 mRNA. Translation: AAA32863.1.
AC005398 Genomic DNA. Translation: AAC69381.1.
CP002685 Genomic DNA. Translation: AEC06314.1.
DQ446496 Genomic DNA. Translation: ABE65442.1.
AY064023 mRNA. Translation: AAL36379.1.
AY117187 mRNA. Translation: AAM51262.1.
PIRiJQ1693.
RefSeqiNP_179068.1. NM_127025.2.
UniGeneiAt.321.
At.74123.

3D structure databases

ProteinModelPortaliP33154.
SMRiP33154. Positions 27-161.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G14610.1.

Proteomic databases

PaxDbiP33154.
PRIDEiP33154.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G14610.1; AT2G14610.1; AT2G14610.
GeneIDi815949.
GrameneiAT2G14610.1; AT2G14610.1; AT2G14610.
KEGGiath:AT2G14610.

Organism-specific databases

TAIRiAT2G14610.

Phylogenomic databases

eggNOGiKOG3017. Eukaryota.
COG2340. LUCA.
InParanoidiP33154.
KOiK13449.
OMAiSAAINEW.
PhylomeDBiP33154.

Miscellaneous databases

PROiP33154.

Gene expression databases

GenevisibleiP33154. AT.

Family and domain databases

Gene3Di3.40.33.10. 1 hit.
InterProiIPR001283. Allrgn_V5/Tpx1.
IPR018244. Allrgn_V5/Tpx1_CS.
IPR014044. CAP_domain.
[Graphical view]
PfamiPF00188. CAP. 1 hit.
[Graphical view]
PRINTSiPR00837. V5TPXLIKE.
SMARTiSM00198. SCP. 1 hit.
[Graphical view]
SUPFAMiSSF55797. SSF55797. 1 hit.
PROSITEiPS01009. CRISP_1. 1 hit.
PS01010. CRISP_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [MRNA], PARTIAL PROTEIN SEQUENCE.
    Strain: cv. Landsberg erecta.
    Tissue: Leaf.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  4. "Simultaneous high-throughput recombinational cloning of open reading frames in closed and open configurations."
    Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.
    Plant Biotechnol. J. 4:317-324(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  5. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.

Entry informationi

Entry nameiPR1_ARATH
AccessioniPrimary (citable) accession number: P33154
Secondary accession number(s): Q1PF70
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 1, 1993
Last modified: February 17, 2016
This is version 121 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.