P33014 (YEED_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0033 protein YeeD

Gene names

Name:	yeeD
Ordered Locus Names:	b2012, JW1994

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	75 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0033 family.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 75	75	UPF0033 protein YeeD		PRO_0000159068

Sequences

	Sequence		Length	Mass (Da)
	P33014 [UniParc]. Last modified February 1, 1994. Version 1. Checksum: 5D6254BE41BEFAFA	FASTA	75	8,148
	10 20 30 40 50 60 MVIKKLDVVT QVCPFPLIEA KAALAEMVSG DELVIEFDCT QATEAIPQWA AEEGHAITDY 70 QQIGDAAWSI TVQKA

References

[1]	"Automated multiplex sequencing of the E.coli genome." Richterich P., Lakey N., Gryan G., Jaehn L., Mintz L., Robison K., Church G.M. Submitted (OCT-1993) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / BHB2600.
[2]	"A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map." Itoh T., Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Kasai H., Kimura S., Kitakawa M., Kitagawa M., Makino K., Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S. , Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G., Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Wada C., Yamamoto Y., Horiuchi T. DNA Res. 3:379-392(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[4]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00009 Genomic DNA. Translation: AAA16418.1. U00096 Genomic DNA. Translation: AAC75073.1. AP009048 Genomic DNA. Translation: BAA15840.1.
PIR	C64966.
RefSeq	NP_416516.1. NC_000913.2. YP_490254.1. NC_007779.1.
3D structure databases
ProteinModelPortal	P33014.
SMR	P33014. Positions 2-73.
ModBase	Search...
Protein-protein interaction databases
STRING	511145.b2012.
Proteomic databases
PaxDb	P33014.
PRIDE	P33014.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC75073; AAC75073; b2012. BAA15840; BAA15840; BAA15840.
GeneID	12931421. 946539.
KEGG	ecj:Y75_p1974. eco:b2012.
PATRIC	32119359. VBIEscCol129921_2089.
Organism-specific databases
EchoBASE	EB1840.
EcoGene	EG11894. yeeD.
Phylogenomic databases
eggNOG	COG0425.
HOGENOM	HOG000259289.
OMA	PRWATES.
ProtClustDB	CLSK880267.
Enzyme and pathway databases
BioCyc	EcoCyc:EG11894-MONOMER. ECOL316407:JW1994-MONOMER.
Gene expression databases
Genevestigator	P33014.
Family and domain databases
Gene3D	3.30.110.40. 1 hit.
InterPro	IPR001455. TusA-like. [Graphical view]
Pfam	PF01206. SirA. 1 hit. [Graphical view]
SUPFAM	SSF64307. SirA_like. 1 hit.
PROSITE	PS01148. UPF0033. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YEED_ECOLI

Accession

Primary (citable) accession number: P33014

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 1, 1994
Last sequence update:	February 1, 1994
Last modified:	May 1, 2013
This is version 84 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program