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P32868 (SIG1S_REOVJ) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Protein sigma-1-small

Short name=Sigma1s
Alternative name(s):
Sigma-s
Sigma1NS
Sigma1bNS
p14
Gene names
Name:S1
OrganismReovirus type 2 (strain D5/Jones) (T2J) (Mammalian orthoreovirus 2) [Complete proteome]
Taxonomic identifier10885 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSpinareovirinaeOrthoreovirus
Virus hostMammalia [TaxID: 40674]

Protein attributes

Sequence length125 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the orthoreovirus sigma-1s protein family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 125125Protein sigma-1-small
PRO_0000222756

Sequences

Sequence LengthMass (Da)Tools
P32868 [UniParc].

Last modified October 1, 1993. Version 1.
Checksum: 71AFD9523EB8A789

FASTA12514,560
        10         20         30         40         50         60 
MENQPTRNTR SRKLRNKLKT SLLMSTGSVT SLIQSKDNWV DYLYACQPLN RELVRTAIEL 

        70         80         90        100        110        120 
IDSSEMSPAY RLALAESIRV YPSWVTESML QNSELASWIQ SRIISLSEHQ DWKLKYQPLL 


MTLDH 

« Hide

References

[1]"Sequences of the S1 genes of the three serotypes of reovirus."
Cashdollar L.W., Chmelo R.A., Wiener J.R., Joklik W.K.
Proc. Natl. Acad. Sci. U.S.A. 82:24-28(1985) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
[2]"Structure of the reovirus cell-attachment protein: a model for the domain organization of sigma 1."
Nibert M.L., Dermody T.S., Fields B.N.
J. Virol. 64:2976-2989(1990) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M10261 Genomic RNA. Translation: AAA66880.1.
M35964 Genomic RNA. Translation: AAA47252.1.
PIRD34829.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR003478. Capsid_sigma_1s.
[Graphical view]
PfamPF02454. Sigma_1s. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSIG1S_REOVJ
AccessionPrimary (citable) accession number: P32868
Secondary accession number(s): Q6LDZ2
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 1, 1993
Last modified: April 3, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families