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Protein

Uncharacterized protein YjcF

Gene

yjcF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11941-MONOMER.
ECOL316407:JW4027-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjcF
Gene namesi
Name:yjcF
Ordered Locus Names:b4066, JW4027
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11941. yjcF.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 430430Uncharacterized protein YjcFPRO_0000169723Add
BLAST

Proteomic databases

PaxDbiP32704.
PRIDEiP32704.

Interactioni

Protein-protein interaction databases

BioGridi4259654. 8 interactions.
DIPiDIP-12551N.
IntActiP32704. 5 interactions.
MINTiMINT-1238461.
STRINGi511145.b4066.

Structurei

3D structure databases

ProteinModelPortaliP32704.
SMRiP32704. Positions 145-304.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1357. LUCA.
HOGENOMiHOG000009675.
InParanoidiP32704.
OMAiQTEDNIH.
PhylomeDBiP32704.

Family and domain databases

InterProiIPR001646. 5peptide_repeat.
[Graphical view]
PfamiPF00805. Pentapeptide. 2 hits.
PF13599. Pentapeptide_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P32704-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRYNGLNNMF FPLCLINDNH SVTSPSHTKK TKSDNYSKHH KNTLIDNKAL
60 70 80 90 100
SLFKMDDHEK VIGLIQKMKR IYDSLPSGKI TKETDRKIHK YFIDIASHAN
110 120 130 140 150
NKCDDRITRR VYLNKDKEVS IKVVYFINNV TVHNNTIEIP QTVNGGYDFS
160 170 180 190 200
HLSLKGIVIK DEDLSNSNFA GCRLQNAIFQ DCNMYKTNFN FAIMEKILFD
210 220 230 240 250
NCILDDSNFA QIKMTDGTLN SCSAMHVQFY NATMNRANIK NTFLDYSNFY
260 270 280 290 300
MAYMAEVNLY KVIAPYINLF RADLSFSKLD LINFEHADLS RVNLNKATLQ
310 320 330 340 350
NINLIDSKLF FTRLTNTFLE MVICTDSNMA NVNFNNANLS NCHFNCSVLT
360 370 380 390 400
KAWMFNIRLY RVNFDEASVQ GMGITILRGE ENISINSDIL VTLQKFFEED
410 420 430
CATHTGMSQT EDNLHAVAMK ITADIMQDAD
Length:430
Mass (Da):49,378
Last modified:October 1, 1993 - v1
Checksum:iC4591C44F256F9C5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43160.1.
U00096 Genomic DNA. Translation: AAC77036.1.
AP009048 Genomic DNA. Translation: BAE78068.1.
PIRiA65215.
RefSeqiNP_418490.1. NC_000913.3.
WP_001270094.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77036; AAC77036; b4066.
BAE78068; BAE78068; BAE78068.
GeneIDi948576.
KEGGiecj:JW4027.
eco:b4066.
PATRICi32123681. VBIEscCol129921_4189.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43160.1.
U00096 Genomic DNA. Translation: AAC77036.1.
AP009048 Genomic DNA. Translation: BAE78068.1.
PIRiA65215.
RefSeqiNP_418490.1. NC_000913.3.
WP_001270094.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP32704.
SMRiP32704. Positions 145-304.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259654. 8 interactions.
DIPiDIP-12551N.
IntActiP32704. 5 interactions.
MINTiMINT-1238461.
STRINGi511145.b4066.

Proteomic databases

PaxDbiP32704.
PRIDEiP32704.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77036; AAC77036; b4066.
BAE78068; BAE78068; BAE78068.
GeneIDi948576.
KEGGiecj:JW4027.
eco:b4066.
PATRICi32123681. VBIEscCol129921_4189.

Organism-specific databases

EchoBASEiEB1885.
EcoGeneiEG11941. yjcF.

Phylogenomic databases

eggNOGiCOG1357. LUCA.
HOGENOMiHOG000009675.
InParanoidiP32704.
OMAiQTEDNIH.
PhylomeDBiP32704.

Enzyme and pathway databases

BioCyciEcoCyc:EG11941-MONOMER.
ECOL316407:JW4027-MONOMER.

Miscellaneous databases

PROiP32704.

Family and domain databases

InterProiIPR001646. 5peptide_repeat.
[Graphical view]
PfamiPF00805. Pentapeptide. 2 hits.
PF13599. Pentapeptide_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYJCF_ECOLI
AccessioniPrimary (citable) accession number: P32704
Secondary accession number(s): Q2M6N8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 1, 1993
Last modified: September 7, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.