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Protein

Uncharacterized protein YjcB

Gene

yjcB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11937-MONOMER.
ECOL316407:JW5718-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjcB
Gene namesi
Name:yjcB
Ordered Locus Names:b4060, JW5718
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11937. yjcB.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9393Uncharacterized protein YjcBPRO_0000169718Add
BLAST

Proteomic databases

PaxDbiP32700.

Interactioni

Protein-protein interaction databases

BioGridi4263246. 8 interactions.
IntActiP32700. 4 interactions.
STRINGi511145.b4060.

Structurei

3D structure databases

ProteinModelPortaliP32700.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105PMV. Bacteria.
ENOG4111X06. LUCA.
HOGENOMiHOG000126920.
OMAiSHTPPEW.

Family and domain databases

InterProiIPR016958. UCP030798.
[Graphical view]
PfamiPF15940. YjcB. 1 hit.
[Graphical view]
PIRSFiPIRSF030798. UCP030798. 1 hit.
ProDomiPD064934. UCP030798. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P32700-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATLTTGVVL LRWQLLSAVM MFLASTLNIR FRRSDYVGLA VISSGLGVVS
60 70 80 90
ACWFAMGLLG ITMADITAIW HNIESVMIEE MNQTPPQWPM ILT
Length:93
Mass (Da):10,303
Last modified:July 15, 1998 - v2
Checksum:i4FC1DE60ABD66B0C
GO

Sequence cautioni

The sequence AAC43154 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43154.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77030.2.
AP009048 Genomic DNA. Translation: BAE78062.1.
RefSeqiNP_418484.4. NC_000913.3.
WP_001295689.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77030; AAC77030; b4060.
BAE78062; BAE78062; BAE78062.
GeneIDi948569.
KEGGiecj:JW5718.
eco:b4060.
PATRICi32123665. VBIEscCol129921_4181.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43154.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77030.2.
AP009048 Genomic DNA. Translation: BAE78062.1.
RefSeqiNP_418484.4. NC_000913.3.
WP_001295689.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP32700.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263246. 8 interactions.
IntActiP32700. 4 interactions.
STRINGi511145.b4060.

Proteomic databases

PaxDbiP32700.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77030; AAC77030; b4060.
BAE78062; BAE78062; BAE78062.
GeneIDi948569.
KEGGiecj:JW5718.
eco:b4060.
PATRICi32123665. VBIEscCol129921_4181.

Organism-specific databases

EchoBASEiEB1881.
EcoGeneiEG11937. yjcB.

Phylogenomic databases

eggNOGiENOG4105PMV. Bacteria.
ENOG4111X06. LUCA.
HOGENOMiHOG000126920.
OMAiSHTPPEW.

Enzyme and pathway databases

BioCyciEcoCyc:EG11937-MONOMER.
ECOL316407:JW5718-MONOMER.

Miscellaneous databases

PROiP32700.

Family and domain databases

InterProiIPR016958. UCP030798.
[Graphical view]
PfamiPF15940. YjcB. 1 hit.
[Graphical view]
PIRSFiPIRSF030798. UCP030798. 1 hit.
ProDomiPD064934. UCP030798. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Entry informationi

Entry nameiYJCB_ECOLI
AccessioniPrimary (citable) accession number: P32700
Secondary accession number(s): Q2M6P4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: July 15, 1998
Last modified: September 7, 2016
This is version 96 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.