P32689 (YJBH_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized lipoprotein YjbH

Gene names

Name:	yjbH
Ordered Locus Names:	b4029, JW3989

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	698 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

General annotation (Comments)

Subcellular location	Cell membrane; Lipid-anchor Probable.
Sequence similarities	To E.coli YmcA.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Signal
PTM	Lipoprotein Palmitate
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	extracellular polysaccharide biosynthetic process Inferred from mutant phenotype PubMed 17379715. Source: EcoCyc
Cellular_component	plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 17	17	Potential
	Chain	18 – 698	681	Uncharacterized lipoprotein YjbH		PRO_0000018056
Amino acid modifications
	Lipidation	18	1	N-palmitoyl cysteine Potential
	Lipidation	18	1	S-diacylglycerol cysteine Potential

Sequences

	Sequence		Length	Mass (Da)
	P32689 [UniParc]. Last modified October 1, 1993. Version 1. Checksum: BFCBF72997EA904A	FASTA	698	78,491
	10 20 30 40 50 60 MKKRHLLSLL ALGISTACYG ETYPAPIGPS QSDFGGVGLL QTPTARMARE GELSLNYRDN 70 80 90 100 110 120 DQYRYYSASV QLFPWLETTL RYTDVRTRQY SSVEAFSGDQ TYKDKAFDLK LRLWEESYWL 130 140 150 160 170 180 PQVAVGARDI GGTGLFDAEY LVASKAWGPF DFTLGLGWGY LGTSGNVKNP LCSASDKYCY 190 200 210 220 230 240 RDNSYKQAGS IDGSQMFHGP ASLFGGVEYQ TPWQPLRLKL EYEGNNYQQD FAGKLEQKSK 250 260 270 280 290 300 FNVGAIYRVT DWADVNLSYE RGNTFMFGVT LRTNFNDLRP SYNDNARPQY QPQPQDAILQ 310 320 330 340 350 360 HSVVANQLTL LKYNAGLADP QIQAKGDTLY VTGEQVKYRD SREGIIRANR IVMNDLPDGI 370 380 390 400 410 420 KTIRITENRL NMPQVTTETD VASLKNHLAG EPLGHETTLA QKRVEPVVPQ STEQGWYIDK 430 440 450 460 470 480 SRFDFHIDPV LNQSVGGPEN FYMYQLGVMG TADLWLTDHL LTTGSLFANL ANNYDKFNYT 490 500 510 520 530 540 NPPQDSHLPR VRTHVREYVQ NDVYVNNLQA NYFQHLGNGF YGQVYGGYLE TMFGGAGAEV 550 560 570 580 590 600 LYRPLDSNWA FGLDANYVKQ RDWRSAKDMM KFTDYSVKTG HLTAYWTPSF AQDVLVKASV 610 620 630 640 650 660 GQYLAGDKGG TLEIAKRFDS GVVVGGYATI TNVSKEEYGE GDFTKGVYVS VPLDLFSSGP 670 680 690 TRSRAAIGWT PLTRDGGQQL GRKFQLYDMT SDRSVNFR

References

[1]	"Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes." Blattner F.R., Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L. Nucleic Acids Res. 21:5408-5417(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[2]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[3]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U00006 Genomic DNA. Translation: AAC43123.1. U00096 Genomic DNA. Translation: AAC76999.1. AP009048 Genomic DNA. Translation: BAE78031.1.
PIR	D65210.
RefSeq	NP_418453.1. NC_000913.2. YP_492172.1. NC_007779.1.
3D structure databases
ProteinModelPortal	P32689.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-12537N.
IntAct	P32689. 3 interactions.
MINT	MINT-1267602.
STRING	511145.b4029.
Proteomic databases
PRIDE	P32689.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC76999; AAC76999; b4029. BAE78031; BAE78031; BAE78031.
GeneID	12933665. 948527.
KEGG	ecj:Y75_p3916. eco:b4029.
PATRIC	32123587. VBIEscCol129921_4142.
Organism-specific databases
EchoBASE	EB1870.
EcoGene	EG11926. yjbH.
Phylogenomic databases
eggNOG	NOG08849.
HOGENOM	HOG000280356.
OMA	GLFDGEF.
ProtClustDB	CLSK879892.
Enzyme and pathway databases
BioCyc	EcoCyc:EG11926-MONOMER. ECOL316407:JW3989-MONOMER.
Gene expression databases
Genevestigator	P32689.
Family and domain databases
InterPro	IPR010344. DUF940. [Graphical view]
Pfam	PF06082. DUF940. 1 hit. [Graphical view]
PROSITE	PS51257. PROKAR_LIPOPROTEIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YJBH_ECOLI

Accession

Primary (citable) accession number: P32689
Secondary accession number(s): Q2M6S5

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 1, 1993
Last sequence update:	October 1, 1993
Last modified:	May 1, 2013
This is version 101 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program