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Protein

Uncharacterized protein YjbG

Gene

yjbG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  • extracellular polysaccharide biosynthetic process Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG11925-MONOMER.
ECOL316407:JW3988-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjbG
Gene namesi
Name:yjbG
Ordered Locus Names:b4028, JW3988
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11925. yjbG.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 245225Uncharacterized protein YjbGPRO_0000013938Add
BLAST

Proteomic databases

PaxDbiP32688.
PRIDEiP32688.

Interactioni

Protein-protein interaction databases

BioGridi4261783. 6 interactions.
STRINGi511145.b4028.

Structurei

3D structure databases

ProteinModelPortaliP32688.
SMRiP32688. Positions 22-245.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli YmcB.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108Q9C. Bacteria.
ENOG4111E8R. LUCA.
HOGENOMiHOG000126863.
OMAiRQPIAYW.
OrthoDBiEOG6HQSMR.

Family and domain databases

InterProiIPR010425. DUF1017.
[Graphical view]
PfamiPF06251. Caps_synth_GfcC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P32688-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKQTIVALL LSVGASSVFA AGTVKVFSNG SSEAKTLTGA EHLIDLVGQP
60 70 80 90 100
RLANSWWPGA VISEELATAA ALRQQQALLT RLAEQGADSS ADDAAAINAL
110 120 130 140 150
RQQIQALKVT GRQKINLDPD IVRVAERGNP PLQGNYTLWV GPPPSTVTLF
160 170 180 190 200
GLISRPGKQP FTPGRDVASY LSDQSLLSGA DRSYAWVVYP DGRTQKAPVA
210 220 230 240
YWNKRHVEPM PGSIIYVGLA DSVWSETPDA LNADILQTLT QRIPQ
Length:245
Mass (Da):26,281
Last modified:October 1, 1993 - v1
Checksum:i57A17CE53078E972
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43122.1.
U00096 Genomic DNA. Translation: AAC76998.1.
AP009048 Genomic DNA. Translation: BAE78030.1.
PIRiC65210.
RefSeqiNP_418452.1. NC_000913.3.
WP_000595558.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76998; AAC76998; b4028.
BAE78030; BAE78030; BAE78030.
GeneIDi948526.
KEGGiecj:JW3988.
eco:b4028.
PATRICi32123585. VBIEscCol129921_4141.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43122.1.
U00096 Genomic DNA. Translation: AAC76998.1.
AP009048 Genomic DNA. Translation: BAE78030.1.
PIRiC65210.
RefSeqiNP_418452.1. NC_000913.3.
WP_000595558.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP32688.
SMRiP32688. Positions 22-245.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261783. 6 interactions.
STRINGi511145.b4028.

Proteomic databases

PaxDbiP32688.
PRIDEiP32688.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76998; AAC76998; b4028.
BAE78030; BAE78030; BAE78030.
GeneIDi948526.
KEGGiecj:JW3988.
eco:b4028.
PATRICi32123585. VBIEscCol129921_4141.

Organism-specific databases

EchoBASEiEB1869.
EcoGeneiEG11925. yjbG.

Phylogenomic databases

eggNOGiENOG4108Q9C. Bacteria.
ENOG4111E8R. LUCA.
HOGENOMiHOG000126863.
OMAiRQPIAYW.
OrthoDBiEOG6HQSMR.

Enzyme and pathway databases

BioCyciEcoCyc:EG11925-MONOMER.
ECOL316407:JW3988-MONOMER.

Miscellaneous databases

PROiP32688.

Family and domain databases

InterProiIPR010425. DUF1017.
[Graphical view]
PfamiPF06251. Caps_synth_GfcC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes."
    Blattner F.R., Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L.
    Nucleic Acids Res. 21:5408-5417(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYJBG_ECOLI
AccessioniPrimary (citable) accession number: P32688
Secondary accession number(s): Q2M6S6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 1, 1993
Last modified: January 20, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.