Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized protein YjbD

Gene

yjbD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11922-MONOMER.
ECOL316407:JW3983-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjbD
Gene namesi
Name:yjbD
Ordered Locus Names:b4023, JW3983
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11922. yjbD.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9090Uncharacterized protein YjbDPRO_0000169710Add
BLAST

Proteomic databases

PaxDbiP32685.

Interactioni

Protein-protein interaction databases

IntActiP32685. 6 interactions.
STRINGi511145.b4023.

Structurei

3D structure databases

ProteinModelPortaliP32685.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108ZR5. Bacteria.
ENOG4111P78. LUCA.
HOGENOMiHOG000126842.
OMAiAYKPDAE.
OrthoDBiEOG6PKFH2.

Family and domain databases

InterProiIPR020317. Uncharacterised_YjbD.
[Graphical view]
PfamiPF11656. DUF3811. 1 hit.
[Graphical view]
ProDomiPD063639. Uncharacterised_YjbD. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P32685-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALPRITQKE MTEREQRELK TLLDRARIAH GRVLTNSETN SIKKDYIDKL
60 70 80 90
MVEREAEAKK ARQLKKKQAY KPDPEASFSW SANTSTRGRR
Length:90
Mass (Da):10,532
Last modified:October 1, 1993 - v1
Checksum:iEE6D52B1932AD9F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43117.1.
U00096 Genomic DNA. Translation: AAC76993.1.
AP009048 Genomic DNA. Translation: BAE78025.1.
PIRiF65209.
RefSeqiNP_418447.1. NC_000913.3.
WP_001207634.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76993; AAC76993; b4023.
BAE78025; BAE78025; BAE78025.
GeneIDi948518.
KEGGiecj:JW3983.
eco:b4023.
PATRICi32123575. VBIEscCol129921_4136.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43117.1.
U00096 Genomic DNA. Translation: AAC76993.1.
AP009048 Genomic DNA. Translation: BAE78025.1.
PIRiF65209.
RefSeqiNP_418447.1. NC_000913.3.
WP_001207634.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP32685.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP32685. 6 interactions.
STRINGi511145.b4023.

Proteomic databases

PaxDbiP32685.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76993; AAC76993; b4023.
BAE78025; BAE78025; BAE78025.
GeneIDi948518.
KEGGiecj:JW3983.
eco:b4023.
PATRICi32123575. VBIEscCol129921_4136.

Organism-specific databases

EchoBASEiEB1866.
EcoGeneiEG11922. yjbD.

Phylogenomic databases

eggNOGiENOG4108ZR5. Bacteria.
ENOG4111P78. LUCA.
HOGENOMiHOG000126842.
OMAiAYKPDAE.
OrthoDBiEOG6PKFH2.

Enzyme and pathway databases

BioCyciEcoCyc:EG11922-MONOMER.
ECOL316407:JW3983-MONOMER.

Miscellaneous databases

PROiP32685.

Family and domain databases

InterProiIPR020317. Uncharacterised_YjbD.
[Graphical view]
PfamiPF11656. DUF3811. 1 hit.
[Graphical view]
ProDomiPD063639. Uncharacterised_YjbD. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

  1. "Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes."
    Blattner F.R., Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L.
    Nucleic Acids Res. 21:5408-5417(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYJBD_ECOLI
AccessioniPrimary (citable) accession number: P32685
Secondary accession number(s): Q2M6T1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 1, 1993
Last modified: November 11, 2015
This is version 94 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.