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Protein

Uncharacterized HTH-type transcriptional regulator YijO

Gene

yijO

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi188 – 207H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

  • regulation of transcription, DNA-templated Source: GO_Central
  • transcription, DNA-templated Source: EcoCyc

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:EG11913-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YijO
Gene namesi
Name:yijO
Ordered Locus Names:b3954, JW3926
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi

Organism-specific databases

EcoGeneiEG11913 yijO

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001946161 – 283Uncharacterized HTH-type transcriptional regulator YijOAdd BLAST283

Proteomic databases

PaxDbiP32677
PRIDEiP32677

Interactioni

Protein-protein interaction databases

BioGridi4259448, 8 interactors
IntActiP32677, 4 interactors
STRINGi316385.ECDH10B_4142

Structurei

3D structure databases

ProteinModelPortaliP32677
SMRiP32677
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4106R3P Bacteria
ENOG410YHRH LUCA
HOGENOMiHOG000274763
InParanoidiP32677
OMAiAVGFNEY
PhylomeDBiP32677

Family and domain databases

InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR018060 HTH_AraC
IPR018062 HTH_AraC-typ_CS
IPR020449 Tscrpt_reg_HTH_AraC-type
PfamiView protein in Pfam
PF12833 HTH_18, 1 hit
PRINTSiPR00032 HTHARAC
SMARTiView protein in SMART
SM00342 HTH_ARAC, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS00041 HTH_ARAC_FAMILY_1, 1 hit
PS01124 HTH_ARAC_FAMILY_2, 1 hit

Sequencei

Sequence statusi: Complete.

P32677-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYHDVSYLLS RLINGPLSLR QIYFASSNGP VPDLAYQVDF PRLEIVLEGE
60 70 80 90 100
FVDTGAGATL VPGDVLYVPA GGWNFPQWQA PATTFSVLFG KQQLGFSVVQ
110 120 130 140 150
WDGKQYQNLA KQHVARRGPR IGSFLLQTLN EMQMQPQEQQ TARLIVASLL
160 170 180 190 200
SHCRDLLGSQ IQTASRSQAL FEAIRDYIDE RYASALTRES VAQAFYISPN
210 220 230 240 250
YLSHLFQKTG AIGFNEYLNH TRLEHAKTLL KGYDLKVKEV AHACGFVDSN
260 270 280
YFCRLFRKNT ERSPSEYRRQ YHSQLTEKPT TPE
Length:283
Mass (Da):32,149
Last modified:October 1, 1993 - v1
Checksum:i0BEFD54BAF323CDE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA Translation: AAC43060.1
U00096 Genomic DNA Translation: AAC76936.1
AP009048 Genomic DNA Translation: BAE77357.1
PIRiE65202
RefSeqiNP_418389.1, NC_000913.3
WP_000274636.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC76936; AAC76936; b3954
BAE77357; BAE77357; BAE77357
GeneIDi948451
KEGGiecj:JW3926
eco:b3954
PATRICifig|1411691.4.peg.2751

Similar proteinsi

Entry informationi

Entry nameiYIJO_ECOLI
AccessioniPrimary (citable) accession number: P32677
Secondary accession number(s): Q2M8P9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 1, 1993
Last modified: March 28, 2018
This is version 131 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

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