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Protein

Uncharacterized protein YijF

Gene

yijF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11903-MONOMER.
ECOL316407:JW3916-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YijF
Gene namesi
Name:yijF
Ordered Locus Names:b3944, JW3916
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11903. yijF.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 205187Uncharacterized protein YijFPRO_0000013936Add
BLAST

Proteomic databases

PaxDbiP32668.

Interactioni

Protein-protein interaction databases

BioGridi4262652. 11 interactions.
STRINGi511145.b3944.

Structurei

3D structure databases

ProteinModelPortaliP32668.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108XC3. Bacteria.
COG3738. LUCA.
HOGENOMiHOG000010609.
InParanoidiP32668.
KOiK09974.
OMAiPGNLPHI.
OrthoDBiEOG696C37.

Family and domain databases

InterProiIPR009706. DUF1287.
[Graphical view]
PfamiPF06940. DUF1287. 1 hit.
[Graphical view]
PIRSFiPIRSF011444. DUF1287. 1 hit.
ProDomiPD357862. DUF1287. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P32668-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKASLALLSL LTAFTSHSLK SPAVPPTVVQ IQANTNLAIA DGARQQIGST
60 70 80 90 100
LFYDPAYVQL TYPGGDVPQE RGVCSDVVIR ALRSQKVDLQ KLVHEDMAKN
110 120 130 140 150
FAEYPQKWKL KRPDSNIDHR RVPNLETWFS RHDKTRPTSK NPSDYQAGDI
160 170 180 190 200
VSWRLDNGLA HIGVVSDGFA RDGTPLVIHN IGAGAQEEDV LFNWRMVGHY

RYFVK
Length:205
Mass (Da):22,955
Last modified:October 1, 1993 - v1
Checksum:i4940E5A9B7F369F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43050.1.
U00096 Genomic DNA. Translation: AAC76926.1.
AP009048 Genomic DNA. Translation: BAE77366.1.
PIRiI78665.
RefSeqiNP_418379.1. NC_000913.3.
WP_000647891.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76926; AAC76926; b3944.
BAE77366; BAE77366; BAE77366.
GeneIDi948441.
KEGGiecj:JW3916.
eco:b3944.
PATRICi32123409. VBIEscCol129921_4065.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43050.1.
U00096 Genomic DNA. Translation: AAC76926.1.
AP009048 Genomic DNA. Translation: BAE77366.1.
PIRiI78665.
RefSeqiNP_418379.1. NC_000913.3.
WP_000647891.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP32668.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262652. 11 interactions.
STRINGi511145.b3944.

Proteomic databases

PaxDbiP32668.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76926; AAC76926; b3944.
BAE77366; BAE77366; BAE77366.
GeneIDi948441.
KEGGiecj:JW3916.
eco:b3944.
PATRICi32123409. VBIEscCol129921_4065.

Organism-specific databases

EchoBASEiEB1848.
EcoGeneiEG11903. yijF.

Phylogenomic databases

eggNOGiENOG4108XC3. Bacteria.
COG3738. LUCA.
HOGENOMiHOG000010609.
InParanoidiP32668.
KOiK09974.
OMAiPGNLPHI.
OrthoDBiEOG696C37.

Enzyme and pathway databases

BioCyciEcoCyc:EG11903-MONOMER.
ECOL316407:JW3916-MONOMER.

Miscellaneous databases

PROiP32668.

Family and domain databases

InterProiIPR009706. DUF1287.
[Graphical view]
PfamiPF06940. DUF1287. 1 hit.
[Graphical view]
PIRSFiPIRSF011444. DUF1287. 1 hit.
ProDomiPD357862. DUF1287. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

  1. "Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes."
    Blattner F.R., Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L.
    Nucleic Acids Res. 21:5408-5417(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYIJF_ECOLI
AccessioniPrimary (citable) accession number: P32668
Secondary accession number(s): Q2M8P0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 1, 1993
Last modified: January 20, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.