Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Single-stranded DNA-binding protein RIM1, mitochondrial

Gene

RIM1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

This protein binds preferentially and cooperatively to single-stranded DNA (ssDNS). Involved in mitochondrial DNA replication. Stimulates PIF1 helicase activity.1 Publication

Miscellaneous

Present with 3060 molecules/cell in log phase SD medium.1 Publication

GO - Molecular functioni

  • single-stranded DNA binding Source: SGD

GO - Biological processi

  • mitochondrial DNA replication Source: SGD
  • mitochondrial genome maintenance Source: SGD
  • positive regulation of mitochondrial DNA replication Source: SGD

Keywordsi

Molecular functionDNA-binding
Biological processDNA replication

Enzyme and pathway databases

BioCyciYEAST:G3O-29415-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Single-stranded DNA-binding protein RIM1, mitochondrial
Alternative name(s):
Mitochondrial ssDNA-binding protein
Gene namesi
Name:RIM1
Ordered Locus Names:YCR028C-A
ORF Names:YCR28C-A
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:YCR028C-A
SGDiS000007222 RIM1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 17MitochondrionAdd BLAST17
ChainiPRO_000003326218 – 135Single-stranded DNA-binding protein RIM1, mitochondrialAdd BLAST118

Proteomic databases

MaxQBiP32445
PaxDbiP32445
PRIDEiP32445
TopDownProteomicsiP32445

Interactioni

Subunit structurei

Homotetramer. Interacts with PIF1.1 Publication

Protein-protein interaction databases

BioGridi31012, 413 interactors
DIPiDIP-7376N
IntActiP32445, 46 interactors
MINTiP32445
STRINGi4932.YCR028C-A

Structurei

3D structure databases

ProteinModelPortaliP32445
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini19 – 117SSBPROSITE-ProRule annotationAdd BLAST99

Keywords - Domaini

Transit peptide

Phylogenomic databases

HOGENOMiHOG000000901
InParanoidiP32445
OMAiMQLYVEC
OrthoDBiEOG092C5PM6

Family and domain databases

CDDicd04496 SSB_OBF, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000424 Primosome_PriB/ssb
IPR011344 ssDNA-bd
PANTHERiPTHR10302 PTHR10302, 1 hit
PTHR10302:SF0 PTHR10302:SF0, 1 hit
PfamiView protein in Pfam
PF00436 SSB, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
PROSITEiView protein in PROSITE
PS50935 SSB, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P32445-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFLRTQARFF HATTKKMDFS KMSIVGRIGS EFTEHTSANN NRYLKYSIAS
60 70 80 90 100
QPRRDGQTNW YNITVFNEPQ INFLTEYVRK GALVYVEADA ANYVFERDDG
110 120 130
SKGTTLSLVQ KDINLLKNGK KLEDAEGQEN AASSE
Length:135
Mass (Da):15,386
Last modified:October 1, 1993 - v1
Checksum:i9F913C2FC9EF6E82
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S43128 Genomic DNA Translation: AAB22978.1
S43129 mRNA Translation: AAD13828.1
X59720 Genomic DNA Translation: CAA42321.2
BK006937 Genomic DNA Translation: DAA07508.1
PIRiS23548
RefSeqiNP_009958.2, NM_001184315.1

Genome annotation databases

EnsemblFungiiCAA42321; CAA42321; CAA42321
YCR028C-A; YCR028C-A; YCR028C-A
GeneIDi850395
KEGGisce:YCR028C-A

Similar proteinsi

Entry informationi

Entry nameiRIM1_YEAST
AccessioniPrimary (citable) accession number: P32445
Secondary accession number(s): D6VR39, O11851
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 1, 1993
Last modified: May 23, 2018
This is version 156 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome III
    Yeast (Saccharomyces cerevisiae) chromosome III: entries and gene names

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health