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Protein

50S ribosomal protein L37e

Gene

rpl37e

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA.

Cofactori

Zn2+CuratedNote: Binds 1 zinc ion per subunit.Curated

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi20ZincCurated1
Metal bindingi23ZincCurated1
Metal bindingi35ZincCurated1
Metal bindingi38ZincCurated1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri20 – 38C4-typeCuratedAdd BLAST19

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

Metal-binding, RNA-binding, rRNA-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L37e
Alternative name(s):
L35e
Gene namesi
Name:rpl37e
Ordered Locus Names:rrnAC0797.1
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001397262 – 5750S ribosomal protein L37eAdd BLAST56

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Interacts weakly with protein L4.2 Publications

Structurei

Secondary structure

157
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi6 – 9Combined sources4
Beta strandi17 – 19Combined sources3
Turni21 – 23Combined sources3
Beta strandi25 – 29Combined sources5
Turni30 – 33Combined sources4
Turni36 – 38Combined sources3
Turni40 – 42Combined sources3
Helixi50 – 52Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FFKX-ray2.40X2-57[»]
1JJ2X-ray2.40Z2-57[»]
1K73X-ray3.0122-57[»]
1K8AX-ray3.0022-57[»]
1K9MX-ray3.0022-57[»]
1KC8X-ray3.0122-57[»]
1KD1X-ray3.0022-57[»]
1KQSX-ray3.10Z2-57[»]
1M1KX-ray3.2022-57[»]
1M90X-ray2.8022-57[»]
1N8RX-ray3.0022-57[»]
1NJIX-ray3.0022-57[»]
1Q7YX-ray3.2022-57[»]
1Q81X-ray2.9522-57[»]
1Q82X-ray2.9822-57[»]
1Q86X-ray3.0022-57[»]
1QVFX-ray3.10Z2-57[»]
1QVGX-ray2.90Z2-57[»]
1S72X-ray2.4011-57[»]
1VQ4X-ray2.7011-57[»]
1VQ5X-ray2.6011-57[»]
1VQ6X-ray2.7011-57[»]
1VQ7X-ray2.5011-57[»]
1VQ8X-ray2.2011-57[»]
1VQ9X-ray2.4011-57[»]
1VQKX-ray2.3011-57[»]
1VQLX-ray2.3011-57[»]
1VQMX-ray2.3011-57[»]
1VQNX-ray2.4011-57[»]
1VQOX-ray2.2011-57[»]
1VQPX-ray2.2511-57[»]
1W2BX-ray3.50Z2-57[»]
1YHQX-ray2.4011-57[»]
1YI2X-ray2.6511-57[»]
1YIJX-ray2.6011-57[»]
1YITX-ray2.8011-57[»]
1YJ9X-ray2.9011-57[»]
1YJNX-ray3.0011-57[»]
1YJWX-ray2.9011-57[»]
2OTJX-ray2.9011-57[»]
2OTLX-ray2.7011-57[»]
2QA4X-ray3.0011-57[»]
2QEXX-ray2.9011-57[»]
3CC2X-ray2.4011-57[»]
3CC4X-ray2.7011-57[»]
3CC7X-ray2.7011-57[»]
3CCEX-ray2.7511-57[»]
3CCJX-ray2.7011-57[»]
3CCLX-ray2.9011-57[»]
3CCMX-ray2.5511-57[»]
3CCQX-ray2.9011-57[»]
3CCRX-ray3.0011-57[»]
3CCSX-ray2.9511-57[»]
3CCUX-ray2.8011-57[»]
3CCVX-ray2.9011-57[»]
3CD6X-ray2.7511-57[»]
3CMAX-ray2.8011-57[»]
3CMEX-ray2.9511-57[»]
3CPWX-ray2.70Z1-57[»]
3CXCX-ray3.00Z2-57[»]
3G4SX-ray3.2012-57[»]
3G6EX-ray2.7012-57[»]
3G71X-ray2.8512-57[»]
3I55X-ray3.1111-57[»]
3I56X-ray2.9011-57[»]
3OW2X-ray2.70Z2-57[»]
4ADXelectron microscopy6.6011-57[»]
4V9FX-ray2.4011-57[»]
ProteinModelPortaliP32410.
SMRiP32410.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP32410.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L37e family.Curated

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri20 – 38C4-typeCuratedAdd BLAST19

Keywords - Domaini

Zinc-finger

Family and domain databases

Gene3Di2.20.25.30. 1 hit.
HAMAPiMF_00547. Ribosomal_L37e. 1 hit.
InterProiIPR011331. Ribosomal_L37ae/L37e.
IPR001569. Ribosomal_L37e.
IPR018267. Ribosomal_L37e_CS.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01907. Ribosomal_L37e. 1 hit.
[Graphical view]
ProDomiPD005132. Ribosomal_L37e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF57829. SSF57829. 1 hit.
PROSITEiPS01077. RIBOSOMAL_L37E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P32410-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGAGTPSQG KKNTTTHTKC RRCGEKSYHT KKKVCSSCGF GKSAKRRDYE

WQSKAGE
Length:57
Mass (Da):6,314
Last modified:January 23, 2007 - v2
Checksum:iA21A05AACA3112EC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA. No translation available.
PIRiS33789.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA. No translation available.
PIRiS33789.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FFKX-ray2.40X2-57[»]
1JJ2X-ray2.40Z2-57[»]
1K73X-ray3.0122-57[»]
1K8AX-ray3.0022-57[»]
1K9MX-ray3.0022-57[»]
1KC8X-ray3.0122-57[»]
1KD1X-ray3.0022-57[»]
1KQSX-ray3.10Z2-57[»]
1M1KX-ray3.2022-57[»]
1M90X-ray2.8022-57[»]
1N8RX-ray3.0022-57[»]
1NJIX-ray3.0022-57[»]
1Q7YX-ray3.2022-57[»]
1Q81X-ray2.9522-57[»]
1Q82X-ray2.9822-57[»]
1Q86X-ray3.0022-57[»]
1QVFX-ray3.10Z2-57[»]
1QVGX-ray2.90Z2-57[»]
1S72X-ray2.4011-57[»]
1VQ4X-ray2.7011-57[»]
1VQ5X-ray2.6011-57[»]
1VQ6X-ray2.7011-57[»]
1VQ7X-ray2.5011-57[»]
1VQ8X-ray2.2011-57[»]
1VQ9X-ray2.4011-57[»]
1VQKX-ray2.3011-57[»]
1VQLX-ray2.3011-57[»]
1VQMX-ray2.3011-57[»]
1VQNX-ray2.4011-57[»]
1VQOX-ray2.2011-57[»]
1VQPX-ray2.2511-57[»]
1W2BX-ray3.50Z2-57[»]
1YHQX-ray2.4011-57[»]
1YI2X-ray2.6511-57[»]
1YIJX-ray2.6011-57[»]
1YITX-ray2.8011-57[»]
1YJ9X-ray2.9011-57[»]
1YJNX-ray3.0011-57[»]
1YJWX-ray2.9011-57[»]
2OTJX-ray2.9011-57[»]
2OTLX-ray2.7011-57[»]
2QA4X-ray3.0011-57[»]
2QEXX-ray2.9011-57[»]
3CC2X-ray2.4011-57[»]
3CC4X-ray2.7011-57[»]
3CC7X-ray2.7011-57[»]
3CCEX-ray2.7511-57[»]
3CCJX-ray2.7011-57[»]
3CCLX-ray2.9011-57[»]
3CCMX-ray2.5511-57[»]
3CCQX-ray2.9011-57[»]
3CCRX-ray3.0011-57[»]
3CCSX-ray2.9511-57[»]
3CCUX-ray2.8011-57[»]
3CCVX-ray2.9011-57[»]
3CD6X-ray2.7511-57[»]
3CMAX-ray2.8011-57[»]
3CMEX-ray2.9511-57[»]
3CPWX-ray2.70Z1-57[»]
3CXCX-ray3.00Z2-57[»]
3G4SX-ray3.2012-57[»]
3G6EX-ray2.7012-57[»]
3G71X-ray2.8512-57[»]
3I55X-ray3.1111-57[»]
3I56X-ray2.9011-57[»]
3OW2X-ray2.70Z2-57[»]
4ADXelectron microscopy6.6011-57[»]
4V9FX-ray2.4011-57[»]
ProteinModelPortaliP32410.
SMRiP32410.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiP32410.

Family and domain databases

Gene3Di2.20.25.30. 1 hit.
HAMAPiMF_00547. Ribosomal_L37e. 1 hit.
InterProiIPR011331. Ribosomal_L37ae/L37e.
IPR001569. Ribosomal_L37e.
IPR018267. Ribosomal_L37e_CS.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01907. Ribosomal_L37e. 1 hit.
[Graphical view]
ProDomiPD005132. Ribosomal_L37e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF57829. SSF57829. 1 hit.
PROSITEiPS01077. RIBOSOMAL_L37E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL37_HALMA
AccessioniPrimary (citable) accession number: P32410
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: January 23, 2007
Last modified: November 2, 2016
This is version 104 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.