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Protein

UPF0381 protein YiiS

Gene

yiiS

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11876-MONOMER.
ECOL316407:JW3893-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0381 protein YiiS
Gene namesi
Name:yiiS
Ordered Locus Names:b3922, JW3893
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11876. yiiS.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001696921 – 99UPF0381 protein YiiSAdd BLAST99

Proteomic databases

PaxDbiP32162.
PRIDEiP32162.

Interactioni

Protein-protein interaction databases

BioGridi4261395. 12 interactors.
IntActiP32162. 28 interactors.
STRINGi511145.b3922.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2K3INMR-A1-99[»]
ProteinModelPortaliP32162.
SMRiP32162.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP32162.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0381 family.Curated

Phylogenomic databases

eggNOGiENOG41065TG. Bacteria.
COG3691. LUCA.
HOGENOMiHOG000270330.
OMAiGCAIDVG.

Family and domain databases

InterProiIPR005272. CHP00743.
[Graphical view]
PfamiPF04175. DUF406. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00743. TIGR00743. 1 hit.

Sequencei

Sequence statusi: Complete.

P32162-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKDVVDKCST KGCAIDIGTV IDNDNCTSKF SRFFATREEA ESFMTKLKEL
60 70 80 90
AAATSSADEG ASVAYKIKDL EGQVELDAAF TFSCQAEMII FELSLRSLA
Length:99
Mass (Da):10,776
Last modified:October 1, 1993 - v1
Checksum:i526113F9E878D802
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19201 Genomic DNA. Translation: AAB03054.1.
U00096 Genomic DNA. Translation: AAC76904.1.
AP009048 Genomic DNA. Translation: BAE77388.1.
PIRiS40865.
RefSeqiNP_418357.1. NC_000913.3.
WP_000655989.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76904; AAC76904; b3922.
BAE77388; BAE77388; BAE77388.
GeneIDi948416.
KEGGiecj:JW3893.
eco:b3922.
PATRICi32123357. VBIEscCol129921_4039.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19201 Genomic DNA. Translation: AAB03054.1.
U00096 Genomic DNA. Translation: AAC76904.1.
AP009048 Genomic DNA. Translation: BAE77388.1.
PIRiS40865.
RefSeqiNP_418357.1. NC_000913.3.
WP_000655989.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2K3INMR-A1-99[»]
ProteinModelPortaliP32162.
SMRiP32162.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261395. 12 interactors.
IntActiP32162. 28 interactors.
STRINGi511145.b3922.

Proteomic databases

PaxDbiP32162.
PRIDEiP32162.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76904; AAC76904; b3922.
BAE77388; BAE77388; BAE77388.
GeneIDi948416.
KEGGiecj:JW3893.
eco:b3922.
PATRICi32123357. VBIEscCol129921_4039.

Organism-specific databases

EchoBASEiEB1822.
EcoGeneiEG11876. yiiS.

Phylogenomic databases

eggNOGiENOG41065TG. Bacteria.
COG3691. LUCA.
HOGENOMiHOG000270330.
OMAiGCAIDVG.

Enzyme and pathway databases

BioCyciEcoCyc:EG11876-MONOMER.
ECOL316407:JW3893-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP32162.
PROiP32162.

Family and domain databases

InterProiIPR005272. CHP00743.
[Graphical view]
PfamiPF04175. DUF406. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00743. TIGR00743. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYIIS_ECOLI
AccessioniPrimary (citable) accession number: P32162
Secondary accession number(s): Q2M8L8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 1, 1993
Last modified: November 2, 2016
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families
  4. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.