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P32157 (YIIM_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 106. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein YiiM
Gene names
Name:yiiM
Ordered Locus Names:b3910, JW5559
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length224 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Subunit structure

Monomer. Ref.4

Sequence similarities

Contains 1 MOSC domain.

Sequence caution

The sequence AAB03043.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 224224Protein YiiM
PRO_0000169688

Regions

Domain26 – 163138MOSC

Secondary structure

.......................................... 224
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P32157 [UniParc].

Last modified July 11, 2001. Version 2.
Checksum: D9691FB9357F0E38

FASTA22425,343
        10         20         30         40         50         60 
MRYPVDVYTG KIQAYPEGKP SAIAKIQVDG ELMLTELGLE GDEQAEKKVH GGPDRALCHY 

        70         80         90        100        110        120 
PREHYLYWAR EFPEQAELFV APAFGENLST DGLTESNVYM GDIFRWGEAL IQVSQPRSPC 

       130        140        150        160        170        180 
YKLNYHFDIS DIAQLMQNTG KVGWLYSVIA PGKVSADAPL ELVSRVSDVT VQEAAAIAWH 

       190        200        210        220 
MPFDDDQYHR LLSAAGLSKS WTRTMQKRRL SGKIEDFSRR LWGK 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes."
Plunkett G. III, Burland V., Daniels D.L., Blattner F.R.
Nucleic Acids Res. 21:3391-3398(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[3]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[4]"Structural analysis of a set of proteins resulting from a bacterial genomics project."
Badger J., Sauder J.M., Adams J.M., Antonysamy S., Bain K., Bergseid M.G., Buchanan S.G., Buchanan M.D., Batiyenko Y., Christopher J.A., Emtage S., Eroshkina A., Feil I., Furlong E.B., Gajiwala K.S., Gao X., He D., Hendle J. expand/collapse author list , Huber A., Hoda K., Kearins P., Kissinger C., Laubert B., Lewis H.A., Lin J., Loomis K., Lorimer D., Louie G., Maletic M., Marsh C.D., Miller I., Molinari J., Muller-Dieckmann H.J., Newman J.M., Noland B.W., Pagarigan B., Park F., Peat T.S., Post K.W., Radojicic S., Ramos A., Romero R., Rutter M.E., Sanderson W.E., Schwinn K.D., Tresser J., Winhoven J., Wright T.A., Wu L., Xu J., Harris T.J.R.
Proteins 60:787-796(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (2.33 ANGSTROMS), SUBUNIT.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L19201 Genomic DNA. Translation: AAB03043.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76892.2.
AP009048 Genomic DNA. Translation: BAE77399.1.
PIRS40854.
RefSeqNP_418346.2. NC_000913.3.
YP_491540.1. NC_007779.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1O65X-ray2.33A/B/C1-224[»]
1O67X-ray2.54A/B/C1-224[»]
ProteinModelPortalP32157.
SMRP32157. Positions 1-223.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-12512N.
IntActP32157. 3 interactions.
STRING511145.b3910.

Proteomic databases

PaxDbP32157.
PRIDEP32157.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC76892; AAC76892; b3910.
BAE77399; BAE77399; BAE77399.
GeneID12933649.
948406.
KEGGecj:Y75_p3276.
eco:b3910.
PATRIC32123333. VBIEscCol129921_4027.

Organism-specific databases

EchoBASEEB1816.
EcoGeneEG11870. yiiM.

Phylogenomic databases

eggNOGCOG2258.
HOGENOMHOG000051122.
OMAHMPFDDE.
OrthoDBEOG6P5ZHM.
PhylomeDBP32157.

Enzyme and pathway databases

BioCycEcoCyc:EG11870-MONOMER.
ECOL316407:JW5559-MONOMER.

Gene expression databases

GenevestigatorP32157.

Family and domain databases

Gene3D2.40.33.20. 1 hit.
InterProIPR005163. 3-alpha_domain.
IPR005302. MoCF_Sase_C.
IPR015808. MoCF_Sase_C-like.
IPR011037. Pyrv_Knase-like_insert_dom.
[Graphical view]
PfamPF03475. 3-alpha. 1 hit.
PF03473. MOSC. 1 hit.
[Graphical view]
SUPFAMSSF50800. SSF50800. 1 hit.
PROSITEPS51340. MOSC. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceP32157.
PROP32157.

Entry information

Entry nameYIIM_ECOLI
AccessionPrimary (citable) accession number: P32157
Secondary accession number(s): Q2M8K7
Entry history
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: July 11, 2001
Last modified: May 14, 2014
This is version 106 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene