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Protein

Protein YiiM

Gene

yiiM

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • response to toxic substance Source: EcoCyc
  • toxin catabolic process Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:EG11870-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YiiM
Gene namesi
Name:yiiM
Ordered Locus Names:b3910, JW5559
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11870 yiiM

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001696881 – 224Protein YiiMAdd BLAST224

Proteomic databases

PaxDbiP32157
PRIDEiP32157

Interactioni

Subunit structurei

Monomer.1 Publication

Protein-protein interaction databases

BioGridi4262643, 19 interactors
DIPiDIP-12512N
IntActiP32157, 3 interactors
STRINGi316385.ECDH10B_4100

Structurei

Secondary structure

1224
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi6 – 9Combined sources4
Beta strandi26 – 28Combined sources3
Beta strandi30 – 35Combined sources6
Helixi52 – 55Combined sources4
Beta strandi56 – 61Combined sources6
Helixi63 – 71Combined sources9
Helixi73 – 78Combined sources6
Turni81 – 84Combined sources4
Beta strandi87 – 92Combined sources6
Turni95 – 97Combined sources3
Beta strandi103 – 106Combined sources4
Beta strandi109 – 116Combined sources8
Helixi122 – 126Combined sources5
Helixi132 – 139Combined sources8
Beta strandi144 – 150Combined sources7
Beta strandi152 – 155Combined sources4
Beta strandi160 – 164Combined sources5
Helixi171 – 179Combined sources9
Helixi185 – 192Combined sources8
Helixi199 – 211Combined sources13
Helixi218 – 222Combined sources5

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1O65X-ray2.33A/B/C1-224[»]
1O67X-ray2.54A/B/C1-224[»]
5YHIX-ray2.85A/B1-224[»]
ProteinModelPortaliP32157
SMRiP32157
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP32157

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 163MOSCPROSITE-ProRule annotationAdd BLAST138

Phylogenomic databases

eggNOGiENOG4108RPX Bacteria
COG2258 LUCA
HOGENOMiHOG000051122
InParanoidiP32157
OMAiPFDEEQY
PhylomeDBiP32157

Family and domain databases

InterProiView protein in InterPro
IPR005163 3-alpha_domain
IPR005302 MoCF_Sase_C
IPR011037 Pyrv_Knase-like_insert_dom_sf
PfamiView protein in Pfam
PF03475 3-alpha, 1 hit
PF03473 MOSC, 1 hit
SUPFAMiSSF50800 SSF50800, 1 hit
PROSITEiView protein in PROSITE
PS51340 MOSC, 1 hit

Sequencei

Sequence statusi: Complete.

P32157-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRYPVDVYTG KIQAYPEGKP SAIAKIQVDG ELMLTELGLE GDEQAEKKVH
60 70 80 90 100
GGPDRALCHY PREHYLYWAR EFPEQAELFV APAFGENLST DGLTESNVYM
110 120 130 140 150
GDIFRWGEAL IQVSQPRSPC YKLNYHFDIS DIAQLMQNTG KVGWLYSVIA
160 170 180 190 200
PGKVSADAPL ELVSRVSDVT VQEAAAIAWH MPFDDDQYHR LLSAAGLSKS
210 220
WTRTMQKRRL SGKIEDFSRR LWGK
Length:224
Mass (Da):25,343
Last modified:July 11, 2001 - v2
Checksum:iD9691FB9357F0E38
GO

Sequence cautioni

The sequence AAB03043 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19201 Genomic DNA Translation: AAB03043.1 Different initiation.
U00096 Genomic DNA Translation: AAC76892.2
AP009048 Genomic DNA Translation: BAE77399.1
PIRiS40854
RefSeqiNP_418346.2, NC_000913.3
WP_001270260.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC76892; AAC76892; b3910
BAE77399; BAE77399; BAE77399
GeneIDi948406
KEGGiecj:JW5559
eco:b3910
PATRICifig|1411691.4.peg.2794

Similar proteinsi

Entry informationi

Entry nameiYIIM_ECOLI
AccessioniPrimary (citable) accession number: P32157
Secondary accession number(s): Q2M8K7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: July 11, 2001
Last modified: April 25, 2018
This is version 132 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

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