Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P32157

- YIIM_ECOLI

UniProt

P32157 - YIIM_ECOLI

Protein

Protein YiiM

Gene

yiiM

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 107 (01 Oct 2014)
      Sequence version 2 (11 Jul 2001)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. molybdenum ion binding Source: InterPro
    3. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. response to toxic substance Source: EcoCyc

    Enzyme and pathway databases

    BioCyciEcoCyc:EG11870-MONOMER.
    ECOL316407:JW5559-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein YiiM
    Gene namesi
    Name:yiiM
    Ordered Locus Names:b3910, JW5559
    OrganismiEscherichia coli (strain K12)
    Taxonomic identifieri83333 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

    Organism-specific databases

    EcoGeneiEG11870. yiiM.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 224224Protein YiiMPRO_0000169688Add
    BLAST

    Proteomic databases

    PaxDbiP32157.
    PRIDEiP32157.

    Expressioni

    Gene expression databases

    GenevestigatoriP32157.

    Interactioni

    Subunit structurei

    Monomer.1 Publication

    Protein-protein interaction databases

    DIPiDIP-12512N.
    IntActiP32157. 3 interactions.
    STRINGi511145.b3910.

    Structurei

    Secondary structure

    1
    224
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi6 – 94
    Beta strandi26 – 283
    Beta strandi30 – 356
    Helixi52 – 554
    Beta strandi56 – 616
    Helixi63 – 719
    Helixi73 – 786
    Turni81 – 844
    Beta strandi87 – 926
    Turni95 – 973
    Beta strandi103 – 1064
    Beta strandi109 – 1168
    Helixi122 – 1265
    Helixi132 – 1398
    Beta strandi144 – 1507
    Beta strandi152 – 1554
    Beta strandi160 – 1645
    Helixi171 – 1799
    Helixi185 – 1928
    Helixi199 – 21113
    Helixi218 – 2225

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1O65X-ray2.33A/B/C1-224[»]
    1O67X-ray2.54A/B/C1-224[»]
    ProteinModelPortaliP32157.
    SMRiP32157. Positions 1-223.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiP32157.

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini26 – 163138MOSCPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 MOSC domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiCOG2258.
    HOGENOMiHOG000051122.
    OMAiHMPFDDE.
    OrthoDBiEOG6P5ZHM.
    PhylomeDBiP32157.

    Family and domain databases

    Gene3Di2.40.33.20. 1 hit.
    InterProiIPR005163. 3-alpha_domain.
    IPR005302. MoCF_Sase_C.
    IPR015808. MoCF_Sase_C-like.
    IPR011037. Pyrv_Knase-like_insert_dom.
    [Graphical view]
    PfamiPF03475. 3-alpha. 1 hit.
    PF03473. MOSC. 1 hit.
    [Graphical view]
    SUPFAMiSSF50800. SSF50800. 1 hit.
    PROSITEiPS51340. MOSC. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P32157-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRYPVDVYTG KIQAYPEGKP SAIAKIQVDG ELMLTELGLE GDEQAEKKVH    50
    GGPDRALCHY PREHYLYWAR EFPEQAELFV APAFGENLST DGLTESNVYM 100
    GDIFRWGEAL IQVSQPRSPC YKLNYHFDIS DIAQLMQNTG KVGWLYSVIA 150
    PGKVSADAPL ELVSRVSDVT VQEAAAIAWH MPFDDDQYHR LLSAAGLSKS 200
    WTRTMQKRRL SGKIEDFSRR LWGK 224
    Length:224
    Mass (Da):25,343
    Last modified:July 11, 2001 - v2
    Checksum:iD9691FB9357F0E38
    GO

    Sequence cautioni

    The sequence AAB03043.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L19201 Genomic DNA. Translation: AAB03043.1. Different initiation.
    U00096 Genomic DNA. Translation: AAC76892.2.
    AP009048 Genomic DNA. Translation: BAE77399.1.
    PIRiS40854.
    RefSeqiNP_418346.2. NC_000913.3.
    YP_491540.1. NC_007779.1.

    Genome annotation databases

    EnsemblBacteriaiAAC76892; AAC76892; b3910.
    BAE77399; BAE77399; BAE77399.
    GeneIDi12933649.
    948406.
    KEGGiecj:Y75_p3276.
    eco:b3910.
    PATRICi32123333. VBIEscCol129921_4027.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L19201 Genomic DNA. Translation: AAB03043.1 . Different initiation.
    U00096 Genomic DNA. Translation: AAC76892.2 .
    AP009048 Genomic DNA. Translation: BAE77399.1 .
    PIRi S40854.
    RefSeqi NP_418346.2. NC_000913.3.
    YP_491540.1. NC_007779.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1O65 X-ray 2.33 A/B/C 1-224 [» ]
    1O67 X-ray 2.54 A/B/C 1-224 [» ]
    ProteinModelPortali P32157.
    SMRi P32157. Positions 1-223.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-12512N.
    IntActi P32157. 3 interactions.
    STRINGi 511145.b3910.

    Proteomic databases

    PaxDbi P32157.
    PRIDEi P32157.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC76892 ; AAC76892 ; b3910 .
    BAE77399 ; BAE77399 ; BAE77399 .
    GeneIDi 12933649.
    948406.
    KEGGi ecj:Y75_p3276.
    eco:b3910.
    PATRICi 32123333. VBIEscCol129921_4027.

    Organism-specific databases

    EchoBASEi EB1816.
    EcoGenei EG11870. yiiM.

    Phylogenomic databases

    eggNOGi COG2258.
    HOGENOMi HOG000051122.
    OMAi HMPFDDE.
    OrthoDBi EOG6P5ZHM.
    PhylomeDBi P32157.

    Enzyme and pathway databases

    BioCyci EcoCyc:EG11870-MONOMER.
    ECOL316407:JW5559-MONOMER.

    Miscellaneous databases

    EvolutionaryTracei P32157.
    PROi P32157.

    Gene expression databases

    Genevestigatori P32157.

    Family and domain databases

    Gene3Di 2.40.33.20. 1 hit.
    InterProi IPR005163. 3-alpha_domain.
    IPR005302. MoCF_Sase_C.
    IPR015808. MoCF_Sase_C-like.
    IPR011037. Pyrv_Knase-like_insert_dom.
    [Graphical view ]
    Pfami PF03475. 3-alpha. 1 hit.
    PF03473. MOSC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50800. SSF50800. 1 hit.
    PROSITEi PS51340. MOSC. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes."
      Plunkett G. III, Burland V., Daniels D.L., Blattner F.R.
      Nucleic Acids Res. 21:3391-3398(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / MG1655 / ATCC 47076.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / MG1655 / ATCC 47076.
    3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
      Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
      Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
    4. Cited for: X-RAY CRYSTALLOGRAPHY (2.33 ANGSTROMS), SUBUNIT.

    Entry informationi

    Entry nameiYIIM_ECOLI
    AccessioniPrimary (citable) accession number: P32157
    Secondary accession number(s): Q2M8K7
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 1, 1993
    Last sequence update: July 11, 2001
    Last modified: October 1, 2014
    This is version 107 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. Escherichia coli
      Escherichia coli (strain K12): entries and cross-references to EcoGene
    2. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3