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Protein

Uncharacterized protein YihF

Gene

yihF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11832-MONOMER.
ECOL316407:JW5574-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YihF
Gene namesi
Name:yihF
Ordered Locus Names:b3861, JW5574
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11832. yihF.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_000016967425 – 476Uncharacterized protein YihFAdd BLAST452

Proteomic databases

PaxDbiP32128.
PRIDEiP32128.

Interactioni

Protein-protein interaction databases

BioGridi4261203. 185 interactors.
STRINGi511145.b3861.

Structurei

3D structure databases

ProteinModelPortaliP32128.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli YdgA and H.influenzae HI_1236.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG5339. LUCA.
HOGENOMiHOG000126606.
OMAiPITMLMR.

Family and domain databases

InterProiIPR010352. DUF945.
[Graphical view]
PfamiPF06097. DUF945. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P32128-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRKSATGVI VALAVIWGGG TWYTGTQIQP GVEKFIKDFN DAKKKGEHAY
60 70 80 90 100
DMTLSYQNFD KGFFNSRFQM QMTFDNGAPD LNIKPGQKVV FDVDVEHGPL
110 120 130 140 150
PITMLMHGNV IPALAAAKVN LVNNELTQPL FIAAKNKSPV EATLRFAFGG
160 170 180 190 200
SFSTTLDVAP AEYGKFSFGE GQFTFNGDGS SLSNLDIEGK VEDIVLQLSP
210 220 230 240 250
MNKVTAKSFT IDSLARLEEK KFPVGESESK FNQINIINHG EDVAQIDAFV
260 270 280 290 300
AKTRLDRVKD KDYINVNLTY ELDKLTKGNQ QLGSGEWSLI AESIDPSAVR
310 320 330 340 350
QFIIQYNIAM QKQLAAHPEL ANDEVALQEV NAALFKEYLP LLQKSEPTIK
360 370 380 390 400
QPVRWKNALG ELNANLDISI ADPAKSSSST NKDIKSLNFD VKLPLNVVTE
410 420 430 440 450
TAKQLNLSEG MDAEKAQKQA DKQISGMMTL GQMFQLITID NNTASLQLRY
460 470
TPGKVVFNGQ EMSEEEFMSR AGRFVH
Length:476
Mass (Da):52,637
Last modified:December 4, 2007 - v3
Checksum:i9052C0B53FA58729
GO

Sequence cautioni

The sequence AAB02996 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAE77447 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti226E → Q in CAA56737 (PubMed:7881552).Curated1
Sequence conflicti300R → A in AAB02996 (PubMed:8346018).Curated1
Sequence conflicti316A → M in AAB02996 (PubMed:8346018).Curated1
Sequence conflicti443T → N in CAA56737 (PubMed:7881552).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X80762 Genomic DNA. Translation: CAA56737.1.
L19201 Genomic DNA. Translation: AAB02996.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76859.2.
AP009048 Genomic DNA. Translation: BAE77447.1. Different initiation.
PIRiA65191.
RefSeqiNP_418298.4. NC_000913.3.
WP_001333507.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76859; AAC76859; b3861.
BAE77447; BAE77447; BAE77447.
GeneIDi948352.
KEGGiecj:JW5574.
eco:b3861.
PATRICi32123219. VBIEscCol129921_3970.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X80762 Genomic DNA. Translation: CAA56737.1.
L19201 Genomic DNA. Translation: AAB02996.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76859.2.
AP009048 Genomic DNA. Translation: BAE77447.1. Different initiation.
PIRiA65191.
RefSeqiNP_418298.4. NC_000913.3.
WP_001333507.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP32128.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261203. 185 interactors.
STRINGi511145.b3861.

Proteomic databases

PaxDbiP32128.
PRIDEiP32128.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76859; AAC76859; b3861.
BAE77447; BAE77447; BAE77447.
GeneIDi948352.
KEGGiecj:JW5574.
eco:b3861.
PATRICi32123219. VBIEscCol129921_3970.

Organism-specific databases

EchoBASEiEB1779.
EcoGeneiEG11832. yihF.

Phylogenomic databases

eggNOGiCOG5339. LUCA.
HOGENOMiHOG000126606.
OMAiPITMLMR.

Enzyme and pathway databases

BioCyciEcoCyc:EG11832-MONOMER.
ECOL316407:JW5574-MONOMER.

Miscellaneous databases

PROiP32128.

Family and domain databases

InterProiIPR010352. DUF945.
[Graphical view]
PfamiPF06097. DUF945. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYIHF_ECOLI
AccessioniPrimary (citable) accession number: P32128
Secondary accession number(s): Q2M8F9, Q47164
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: December 4, 2007
Last modified: November 2, 2016
This is version 109 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.