Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative uncharacterized protein YibJ

Gene

yibJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG11766-MONOMER.
ECOL316407:JW5647-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YibJ
Gene namesi
Name:yibJ
Ordered Locus Names:b3595, JW5647
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11766. yibJ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 233233Putative uncharacterized protein YibJPRO_0000169607Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi4261668. 82 interactions.
STRINGi316407.85676448.

Structurei

3D structure databases

ProteinModelPortaliP32109.
SMRiP32109. Positions 92-152.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RHS family.Curated

Phylogenomic databases

eggNOGiCOG3209. LUCA.
HOGENOMiHOG000009634.
OMAiQGRYISQ.
PhylomeDBiP32109.

Family and domain databases

InterProiIPR001826. RHS.
IPR022385. Rhs_assc_core.
[Graphical view]
PfamiPF03527. RHS. 1 hit.
[Graphical view]
PRINTSiPR00394. RHSPROTEIN.
TIGRFAMsiTIGR03696. Rhs_assc_core. 1 hit.

Sequencei

Sequence statusi: Complete.

P32109-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQMLDRLESE ILADRVSEES RRWLASCGLT VEQMKNQMDP VYTPARKIHL
60 70 80 90 100
YHCDHRGLPL ALISTEGATA WCAEYDEWGN LLSDENPHHL QQLIRLPGQQ
110 120 130 140 150
YDEESGLYYN RHRYYDPLLG RYITQDPIGL KGGWNFYQYP LNPVINVDPQ
160 170 180 190 200
GLVDINLYPE SDLIHSVADE INIPGVFTIG GHGTPTSIES ATRSIMTAKD
210 220 230
LAYLIKFDGN YKDGMTVWLF SCNTGKGQNS FAS
Length:233
Mass (Da):26,447
Last modified:October 11, 2004 - v3
Checksum:i33792563C4A7F3AB
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti65 – 651T → K in AAB18572 (PubMed:8041620).Curated
Sequence conflicti68 – 703ATA → TTE in AAB18572 (PubMed:8041620).Curated
Sequence conflicti83 – 842SD → NE in AAB18572 (PubMed:8041620).Curated
Sequence conflicti89 – 891H → Q in AAB18572 (PubMed:8041620).Curated
Sequence conflicti119 – 1191L → Q in AAB18572 (PubMed:8041620).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19044 Genomic DNA. No translation available.
U00039 Genomic DNA. Translation: AAB18572.1.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE77698.1.
PIRiE65159.

Genome annotation databases

EnsemblBacteriaiBAE77698; BAE77698; BAE77698.
KEGGiecj:JW5647.
PATRICi48666878. VBIEscCol107702_3707.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19044 Genomic DNA. No translation available.
U00039 Genomic DNA. Translation: AAB18572.1.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE77698.1.
PIRiE65159.

3D structure databases

ProteinModelPortaliP32109.
SMRiP32109. Positions 92-152.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261668. 82 interactions.
STRINGi316407.85676448.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE77698; BAE77698; BAE77698.
KEGGiecj:JW5647.
PATRICi48666878. VBIEscCol107702_3707.

Organism-specific databases

EchoBASEiEB1716.
EcoGeneiEG11766. yibJ.

Phylogenomic databases

eggNOGiCOG3209. LUCA.
HOGENOMiHOG000009634.
OMAiQGRYISQ.
PhylomeDBiP32109.

Enzyme and pathway databases

BioCyciEcoCyc:EG11766-MONOMER.
ECOL316407:JW5647-MONOMER.

Family and domain databases

InterProiIPR001826. RHS.
IPR022385. Rhs_assc_core.
[Graphical view]
PfamiPF03527. RHS. 1 hit.
[Graphical view]
PRINTSiPR00394. RHSPROTEIN.
TIGRFAMsiTIGR03696. Rhs_assc_core. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYIBJ_ECOLI
AccessioniPrimary (citable) accession number: P32109
Secondary accession number(s): P76717, Q2M7Q8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 11, 2004
Last modified: January 20, 2016
This is version 101 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.