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P31968

- CPCF_SYNP2

UniProt

P31968 - CPCF_SYNP2

Protein

Phycocyanobilin lyase subunit beta

Gene

cpcF

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 1 (01 Jul 1993)
      Previous versions | rss
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    Functioni

    Required for the chromophorylation of the cpcA gene product.

    GO - Molecular functioni

    1. lyase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Lyase

    Enzyme and pathway databases

    BioCyciSSP32049:GKF7-2215-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phycocyanobilin lyase subunit beta (EC:4.-.-.-)
    Alternative name(s):
    Phycocyanin operon protein CpcF
    Gene namesi
    Name:cpcF
    Ordered Locus Names:SYNPCC7002_A2214
    OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
    Taxonomic identifieri32049 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000001688: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. phycobilisome Source: UniProtKB-KW

    Keywords - Cellular componenti

    Phycobilisome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 205205Phycocyanobilin lyase subunit betaPRO_0000199280Add
    BLAST

    Interactioni

    Subunit structurei

    CpcE and CpcF associate to form a lyase.

    Protein-protein interaction databases

    STRINGi32049.SYNPCC7002_A2214.

    Structurei

    3D structure databases

    ProteinModelPortaliP31968.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the CpcE/RpcE/PecE family.Curated

    Phylogenomic databases

    eggNOGiCOG1413.
    HOGENOMiHOG000276575.
    KOiK02289.
    OMAiDYNYGAR.
    OrthoDBiEOG67T5M3.

    Family and domain databases

    Gene3Di1.25.10.10. 1 hit.
    InterProiIPR011989. ARM-like.
    IPR016024. ARM-type_fold.
    IPR004155. PBS_lyase_HEAT.
    [Graphical view]
    PfamiPF03130. HEAT_PBS. 2 hits.
    [Graphical view]
    SUPFAMiSSF48371. SSF48371. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P31968-1 [UniParc]FASTAAdd to Basket

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    MTVDVLIRAV NNPTSAQDLV KNVAQLAATK DEQAIPTLVE VLKFNNPGAA    50
    VAAVNGLINI GEAVVPYLLE NVDGYNYGAR AWMLRIFAGI GDPRALDLLI 100
    EAANKDFAFS VRRSAAKGLG NIQWHKVPDS EREVQQQKVC DCLFLALEDG 150
    EWVVRYGAIA GLEGLSQAIP EARKIVIKNK LTEFLTTEPE AAIRARIQKA 200
    ILSLP 205
    Length:205
    Mass (Da):22,305
    Last modified:July 1, 1993 - v1
    Checksum:iA002E8FACB6B60AB
    GO

    Sequence cautioni

    The sequence ACB00195.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M93569 Genomic DNA. Translation: AAA27309.1.
    CP000951 Genomic DNA. Translation: ACB00195.1. Different initiation.
    RefSeqiWP_012307813.1. NC_010475.1.
    YP_001735450.1. NC_010475.1.

    Genome annotation databases

    EnsemblBacteriaiACB00195; ACB00195; SYNPCC7002_A2214.
    GeneIDi6057351.
    KEGGisyp:SYNPCC7002_A2214.
    PATRICi23819066. VBISynSp37135_2466.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M93569 Genomic DNA. Translation: AAA27309.1 .
    CP000951 Genomic DNA. Translation: ACB00195.1 . Different initiation.
    RefSeqi WP_012307813.1. NC_010475.1.
    YP_001735450.1. NC_010475.1.

    3D structure databases

    ProteinModelPortali P31968.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 32049.SYNPCC7002_A2214.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACB00195 ; ACB00195 ; SYNPCC7002_A2214 .
    GeneIDi 6057351.
    KEGGi syp:SYNPCC7002_A2214.
    PATRICi 23819066. VBISynSp37135_2466.

    Phylogenomic databases

    eggNOGi COG1413.
    HOGENOMi HOG000276575.
    KOi K02289.
    OMAi DYNYGAR.
    OrthoDBi EOG67T5M3.

    Enzyme and pathway databases

    BioCyci SSP32049:GKF7-2215-MONOMER.

    Family and domain databases

    Gene3Di 1.25.10.10. 1 hit.
    InterProi IPR011989. ARM-like.
    IPR016024. ARM-type_fold.
    IPR004155. PBS_lyase_HEAT.
    [Graphical view ]
    Pfami PF03130. HEAT_PBS. 2 hits.
    [Graphical view ]
    SUPFAMi SSF48371. SSF48371. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The cpcE and cpcF genes of Synechococcus sp. PCC 7002. Construction and phenotypic characterization of interposon mutants."
      Zhou J., Gasparich G.E., Stirewalt V.L., de Lorimier R., Bryant D.A.
      J. Biol. Chem. 267:16138-16145(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], CHARACTERIZATION.
    2. "Complete sequence of Synechococcus sp. PCC 7002."
      Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
      Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27264 / PCC 7002 / PR-6.
    3. Cited for: CHARACTERIZATION.

    Entry informationi

    Entry nameiCPCF_SYNP2
    AccessioniPrimary (citable) accession number: P31968
    Secondary accession number(s): B1XIU3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 1, 1993
    Last sequence update: July 1, 1993
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3