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P31967

- CPCE_SYNP2

UniProt

P31967 - CPCE_SYNP2

Protein

Phycocyanobilin lyase subunit alpha

Gene

cpcE

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 71 (01 Oct 2014)
      Sequence version 2 (10 Jun 2008)
      Previous versions | rss
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    Functioni

    Required for the chromophorylation of the cpcA gene product.

    GO - Molecular functioni

    1. lyase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Lyase

    Enzyme and pathway databases

    BioCyciSSP32049:GKF7-2214-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phycocyanobilin lyase subunit alpha (EC:4.-.-.-)
    Alternative name(s):
    Phycocyanin operon protein CpcE
    Gene namesi
    Name:cpcE
    Ordered Locus Names:SYNPCC7002_A2213
    OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
    Taxonomic identifieri32049 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000001688: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. phycobilisome Source: UniProtKB-KW

    Keywords - Cellular componenti

    Phycobilisome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 268268Phycocyanobilin lyase subunit alphaPRO_0000199270Add
    BLAST

    Interactioni

    Subunit structurei

    CpcE and CpcF associate to form a lyase.

    Protein-protein interaction databases

    STRINGi32049.SYNPCC7002_A2213.

    Structurei

    3D structure databases

    ProteinModelPortaliP31967.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the CpcE/RpcE/PecE family.Curated

    Phylogenomic databases

    eggNOGiCOG1413.
    HOGENOMiHOG000276576.
    KOiK02288.
    OMAiLRYYAAW.
    OrthoDBiEOG69D3BK.

    Family and domain databases

    Gene3Di1.25.10.10. 2 hits.
    InterProiIPR011989. ARM-like.
    IPR016024. ARM-type_fold.
    IPR004155. PBS_lyase_HEAT.
    [Graphical view]
    PfamiPF03130. HEAT_PBS. 4 hits.
    [Graphical view]
    SMARTiSM00567. EZ_HEAT. 6 hits.
    [Graphical view]
    SUPFAMiSSF48371. SSF48371. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P31967-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDWQMAEAW TLEEAIANIQ QTEDTGKRYY AAWWFGKFRV QDERAVNALL    50
    AALKDETDRS PDGGYPLRRN AAKALGKLGN LAAVQPLIES LESPDYYVRE 100
    SAAQSLEMLG DRQAIPALQA LLAGGVAAAV KAEGKPHLVQ PYEAVIEALG 150
    TIGATAAIAE IEPFLDHEFA KIRYAALRAL YQLTQEAHYA EQLMEALNGN 200
    QLQLRRSALL DLGAIGYVPA GQAIAKAYAE NSLKLISLKG ILESHLQRTA 250
    ETLDADGLQL LELMDSLL 268
    Length:268
    Mass (Da):29,233
    Last modified:June 10, 2008 - v2
    Checksum:i9AD7AFC6A301D1DA
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti173 – 1731R → P in AAA27308. (PubMed:1644801)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M93569 Genomic DNA. Translation: AAA27308.1.
    CP000951 Genomic DNA. Translation: ACB00194.1.
    RefSeqiWP_012307812.1. NC_010475.1.
    YP_001735449.1. NC_010475.1.

    Genome annotation databases

    EnsemblBacteriaiACB00194; ACB00194; SYNPCC7002_A2213.
    GeneIDi6055870.
    KEGGisyp:SYNPCC7002_A2213.
    PATRICi23819064. VBISynSp37135_2465.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M93569 Genomic DNA. Translation: AAA27308.1 .
    CP000951 Genomic DNA. Translation: ACB00194.1 .
    RefSeqi WP_012307812.1. NC_010475.1.
    YP_001735449.1. NC_010475.1.

    3D structure databases

    ProteinModelPortali P31967.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 32049.SYNPCC7002_A2213.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACB00194 ; ACB00194 ; SYNPCC7002_A2213 .
    GeneIDi 6055870.
    KEGGi syp:SYNPCC7002_A2213.
    PATRICi 23819064. VBISynSp37135_2465.

    Phylogenomic databases

    eggNOGi COG1413.
    HOGENOMi HOG000276576.
    KOi K02288.
    OMAi LRYYAAW.
    OrthoDBi EOG69D3BK.

    Enzyme and pathway databases

    BioCyci SSP32049:GKF7-2214-MONOMER.

    Family and domain databases

    Gene3Di 1.25.10.10. 2 hits.
    InterProi IPR011989. ARM-like.
    IPR016024. ARM-type_fold.
    IPR004155. PBS_lyase_HEAT.
    [Graphical view ]
    Pfami PF03130. HEAT_PBS. 4 hits.
    [Graphical view ]
    SMARTi SM00567. EZ_HEAT. 6 hits.
    [Graphical view ]
    SUPFAMi SSF48371. SSF48371. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The cpcE and cpcF genes of Synechococcus sp. PCC 7002. Construction and phenotypic characterization of interposon mutants."
      Zhou J., Gasparich G.E., Stirewalt V.L., de Lorimier R., Bryant D.A.
      J. Biol. Chem. 267:16138-16145(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], CHARACTERIZATION.
    2. "Complete sequence of Synechococcus sp. PCC 7002."
      Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
      Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27264 / PCC 7002 / PR-6.
    3. Cited for: CHARACTERIZATION.

    Entry informationi

    Entry nameiCPCE_SYNP2
    AccessioniPrimary (citable) accession number: P31967
    Secondary accession number(s): B1XIU2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 1, 1993
    Last sequence update: June 10, 2008
    Last modified: October 1, 2014
    This is version 71 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3