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P31924

- SUS1_ORYSJ

UniProt

P31924 - SUS1_ORYSJ

Protein

Sucrose synthase 1

Gene

SUS1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 93 (01 Oct 2014)
      Sequence version 1 (01 Jul 1993)
      Previous versions | rss
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    Functioni

    Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways.By similarity

    Catalytic activityi

    NDP-glucose + D-fructose = NDP + sucrose.

    GO - Molecular functioni

    1. sucrose synthase activity Source: UniProtKB-EC

    GO - Biological processi

    1. biosynthetic process Source: InterPro
    2. response to carbon dioxide Source: UniProtKB
    3. sucrose metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Protein family/group databases

    CAZyiGT4. Glycosyltransferase Family 4.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Sucrose synthase 1 (EC:2.4.1.13)
    Short name:
    OsSUS1
    Alternative name(s):
    Sucrose synthase 2
    Short name:
    RSs2
    Sucrose-UDP glucosyltransferase 1
    Gene namesi
    Name:SUS1
    Synonyms:RSS2, RSUS1
    Ordered Locus Names:Os03g0401300, LOC_Os03g28330
    ORF Names:OsJ_11182
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 3

    Organism-specific databases

    GrameneiP31924.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 816816Sucrose synthase 1PRO_0000204656Add
    BLAST

    Proteomic databases

    PaxDbiP31924.
    PRIDEiP31924.

    Expressioni

    Tissue specificityi

    Expressed in root phloem and leaf mesophyll. Expressed in phloem tissues and aleurone layers of seeds and at lower levels in the pericarp and endosperm cells (at protein level). Predominantly expressed in elongating tissues including roots, developing leaves and internodes.2 Publications

    Developmental stagei

    Expressed early in seed development and then declines gradually and disappears (at protein level). In the caryopse, strongly expressed during the pre-storage phase, and the expression decreased thereafter.3 Publications

    Inductioni

    Up-regulated by sucrose, fructose and glucose. Up-regulated under elevated CO2 condition.2 Publications

    Interactioni

    Subunit structurei

    Homotetramer or heterotetramer with SUS2.1 Publication

    Structurei

    3D structure databases

    ProteinModelPortaliP31924.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni280 – 757478GT-B glycosyltransferaseBy similarityAdd
    BLAST

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0438.
    HOGENOMiHOG000240125.
    KOiK00695.
    OMAiSHWIKIS.

    Family and domain databases

    InterProiIPR001296. Glyco_trans_1.
    IPR000368. Sucrose_synth.
    IPR012820. Sucrose_synthase_pln/cyn.
    [Graphical view]
    PfamiPF00534. Glycos_transf_1. 1 hit.
    PF00862. Sucrose_synth. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02470. sucr_synth. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P31924-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGEAAGDRVL SRLHSVRERI GDSLSAHPNE LVAVFTRLVN LGKGMLQAHQ    50
    IIAEYNNAIS EADREKLKDG AFEDVLRSAQ EGIVISPWVA LAIRPRPGVW 100
    EYVRVNVSEL AVELLTVPEY LQFKEQLVEE GTNNNFVLEL DFEPFNASFP 150
    RPSLSKSIGN GVQFLNRHLS SKLFHDKESM YPLLNFLRAH NYKGMTMMLN 200
    DRIRSLSALQ GALRKAEEHL SGLSADTPYS EFHHRFQELG LEKGWGDCAK 250
    RSQETIHLLL DLLEAPDPST LEKFLGTIPM VFNVVIMSPH GYFAQANVLG 300
    YPDTGGQVVY ILDQVRAMEN EMLLRIKQQG LNITPRILIV TRLLPDATGT 350
    TCGQRLEKVL GTEHTHILRV PFRTENGIVR KWISRFEVWP YLETFTDDVA 400
    HEIAGELQAN PDLIIGNYSD GNLVACLLAH KMGVTHCTIA HALEKTKYPN 450
    SDLYWKKFED HYHFSCQFTT DLIAMNHADF IITSTFQEIA GNKDTVGQYE 500
    SHMAFTMPGL YRVVHGIDVF DPKFNIVSPG ADMSIYFPYS ESRKRLTSLH 550
    PEIEELLYSE VDNNEHKFML KDRNKPIIFS MARLDRVKNL TGLVELYGRN 600
    PRLQELVNLV VVCGDHGNPS KDKEEQAEFK KMFDLIEQYN LNGHIRWISA 650
    QMNRVRNGEL YRYICDTKGA FVQPAFYEAF GLTVVESMTC GLPTFATAYG 700
    GPAEIIVNGV SGFHIDPYQG DKASALLVEF FEKCQEDPSH WTKISQGGLQ 750
    RIEEKYTWKL YSERLMTLTG VYGFWKYVSN LERRETRRYL EMLYALKYRT 800
    MASTVPLAVE GEPSNK 816
    Length:816
    Mass (Da):92,908
    Last modified:July 1, 1993 - v1
    Checksum:i56704F0B8BEBA947
    GO

    Sequence cautioni

    The sequence ABF96469.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X59046 Genomic DNA. Translation: CAA41774.1.
    HQ895719 mRNA. Translation: AEX32874.1.
    AC084380 Genomic DNA. Translation: AAK52129.1.
    DP000009 Genomic DNA. Translation: ABF96467.1.
    DP000009 Genomic DNA. Translation: ABF96468.1.
    DP000009 Genomic DNA. Translation: ABF96469.1. Sequence problems.
    AP008209 Genomic DNA. Translation: BAF12233.1.
    CM000140 Genomic DNA. Translation: EAZ27243.1.
    AK100334 mRNA. Translation: BAG94557.1.
    PIRiS19139.
    RefSeqiNP_001050319.1. NM_001056854.1.
    UniGeneiOs.5113.

    Genome annotation databases

    EnsemblPlantsiOS03T0401300-01; OS03T0401300-01; OS03G0401300.
    GeneIDi4333062.
    KEGGiosa:4333062.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X59046 Genomic DNA. Translation: CAA41774.1 .
    HQ895719 mRNA. Translation: AEX32874.1 .
    AC084380 Genomic DNA. Translation: AAK52129.1 .
    DP000009 Genomic DNA. Translation: ABF96467.1 .
    DP000009 Genomic DNA. Translation: ABF96468.1 .
    DP000009 Genomic DNA. Translation: ABF96469.1 . Sequence problems.
    AP008209 Genomic DNA. Translation: BAF12233.1 .
    CM000140 Genomic DNA. Translation: EAZ27243.1 .
    AK100334 mRNA. Translation: BAG94557.1 .
    PIRi S19139.
    RefSeqi NP_001050319.1. NM_001056854.1.
    UniGenei Os.5113.

    3D structure databases

    ProteinModelPortali P31924.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GT4. Glycosyltransferase Family 4.

    Proteomic databases

    PaxDbi P31924.
    PRIDEi P31924.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS03T0401300-01 ; OS03T0401300-01 ; OS03G0401300 .
    GeneIDi 4333062.
    KEGGi osa:4333062.

    Organism-specific databases

    Gramenei P31924.

    Phylogenomic databases

    eggNOGi COG0438.
    HOGENOMi HOG000240125.
    KOi K00695.
    OMAi SHWIKIS.

    Family and domain databases

    InterProi IPR001296. Glyco_trans_1.
    IPR000368. Sucrose_synth.
    IPR012820. Sucrose_synthase_pln/cyn.
    [Graphical view ]
    Pfami PF00534. Glycos_transf_1. 1 hit.
    PF00862. Sucrose_synth. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02470. sucr_synth. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Isolation and sequences of rice sucrose synthase cDNA and genomic DNA."
      Yu W.P., Wang A.Y., Juang R.H., Sung H.Y., Su J.C.
      Plant Mol. Biol. 18:139-142(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: cv. Tainung 67.
      Tissue: Seed.
    2. "Complete structures of three rice sucrose synthase isogenes and differential regulation of their expressions."
      Huang J.W., Chen J.T., Yu W.P., Shyur L.F., Wang A.Y., Sung H.Y., Lee P.D., Su J.C.
      Biosci. Biotechnol. Biochem. 60:233-239(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: cv. Tainung 67.
      Tissue: Seed.
    3. "Identification and characterization of the duplicate rice sucrose synthase genes OsSUS5 and OsSUS7 which are associated with the plasma membrane."
      Cho J.I., Kim H.B., Kim C.Y., Hahn T.R., Jeon J.S.
      Mol. Cells 31:553-561(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, DEVELOPMENTAL STAGE.
      Strain: cv. Nipponbare.
    4. "Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species."
      The rice chromosome 3 sequencing consortium
      Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B., Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T., Fadrosh D., Bera J., Weaver B., Jin S.
      , Johri S., Reardon M., Webb K., Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T., Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R., Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J., Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S., Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M., Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L., O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R., Jin W., Lee H.R., Jiang J., Jackson S.
      Genome Res. 15:1284-1291(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    5. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    6. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    7. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    8. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    9. "Purification and characterization of sucrose synthase isozymes from etiolated rice seedlings."
      Huang D.Y., Wang A.-Y.
      Biochem. Mol. Biol. Int. 46:107-113(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: SUBUNIT.
    10. "Differentially and developmentally regulated expression of three rice sucrose synthase genes."
      Wang A.-Y., Kao M.-H., Yang W.-H., Sayion Y., Liu L.-F., Lee P.-D., Su J.-C.
      Plant Cell Physiol. 40:800-807(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
    11. "Sugar-modulated gene expression of sucrose synthase in suspension-cultured cells of rice."
      Liao Y.-C., Wang A.-Y.
      Physiol. Plantarum 118:319-327(2003)
      Cited for: INDUCTION BY SUGARS.
    12. "Expression patterns of genes encoding carbohydrate-metabolizing enzymes and their relationship to grain filling in rice (Oryza sativa L.): comparison of caryopses located at different positions in a panicle."
      Ishimaru T., Hirose T., Matsuda T., Goto A., Takahashi K., Sasaki H., Terao T., Ishii R., Ohsugi R., Yamagishi T.
      Plant Cell Physiol. 46:620-628(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: DEVELOPMENTAL STAGE.
    13. "Effects of elevated CO2 on growth, carbon assimilation, photosynthate accumulation and related enzymes in rice leaves during sink-source transition."
      Li J.-Y., Liu X.-H., Cai Q.-S., Gu H., Zhang S.-S., Wu Y.-Y., Wang C.-J.
      J. Integr. Plant Biol. 50:723-732(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: INDUCTION BY CO2.
    14. "An expression analysis profile for the entire sucrose synthase gene family in rice."
      Hirose T., Scofield G.N., Terao T.
      Plant Sci. 174:534-543(2008)
      Cited for: GENE FAMILY, TISSUE SPECIFICITY.

    Entry informationi

    Entry nameiSUS1_ORYSJ
    AccessioniPrimary (citable) accession number: P31924
    Secondary accession number(s): F4MFT0
    , Q10K07, Q10K08, Q7G7N0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 1, 1993
    Last sequence update: July 1, 1993
    Last modified: October 1, 2014
    This is version 93 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3