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Protein

Uncharacterized protein YddB

Gene

yddB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11743-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YddB
Alternative name(s):
CDS103
Gene namesi
Name:yddB
Ordered Locus Names:b1495, JW1490
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11743 yddB

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001689411 – 790Uncharacterized protein YddBAdd BLAST790

Proteomic databases

PaxDbiP31827
PRIDEiP31827

Interactioni

Protein-protein interaction databases

BioGridi4260786, 154 interactors
DIPiDIP-11661N
IntActiP31827, 1 interactor
STRINGi316385.ECDH10B_1626

Structurei

3D structure databases

ProteinModelPortaliP31827
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To H.influenzae HI_1369.Curated

Phylogenomic databases

eggNOGiENOG4105PE1 Bacteria
ENOG410XSVA LUCA
HOGENOMiHOG000120697
OMAiNRYYGRS

Family and domain databases

Gene3Di2.170.130.10, 1 hit
2.40.170.20, 1 hit
InterProiView protein in InterPro
IPR012910 Plug_dom
IPR037066 Plug_dom_sf
IPR036942 TonB_rcpt_b-brl_sf
PfamiView protein in Pfam
PF07715 Plug, 1 hit

Sequencei

Sequence statusi: Complete.

P31827-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRVLIPGVI LCGADVAQAV DDKNMYMHFF EEMTVYAPVP VPVNGNTHYT
60 70 80 90 100
SESIERLPTG NGNISDLLRT NPAVRMDSTQ STSLNQGDIR PEKISIHGAS
110 120 130 140 150
PYQNAYLIDG ISATNNLNPA NESDASSATN ISGMSQGYYL DVSLLDNVTL
160 170 180 190 200
YDSFVPVEFG RFNGGVIDAK IKRFNADDSK VKLGYRTTRS DWLTSHIDEN
210 220 230 240 250
NKSAFNQGSS GSTYYSPDFK KNFYTLSFNQ ELADNFGVTA GLSRRQSDIT
260 270 280 290 300
RADYVSNDGI VAGRAQYKNV IDTALSKFTW FASDRFTHDL TLKYTGSSRD
310 320 330 340 350
YNTSTFPQSD REMGNKSYGL AWDMDTQLAW AKLRTTVGWD HISDYTRHDH
360 370 380 390 400
DIWYTELSCT YGDITGRCTR GGLGHISQAV DNYTFKTRLD WQKFAVGNVS
410 420 430 440 450
HQPYFGAEYI YSDAWTERHN QSESYVINAA GKKTNHTIYH KGKGRLGIDN
460 470 480 490 500
YTLYMADRIS WRNVSLMPGV RYDYDNYLSN HNISPRFMTE WDIFANQTSM
510 520 530 540 550
ITAGYNRYYG GNILDMGLRD IRNSWTESVS GNKTLTRYQD LKTPYNDELA
560 570 580 590 600
MGLQQKIGKN VIARANYVYR EAHDQISKSS RTDSATKTTI TEYNNDGKTK
610 620 630 640 650
THSFSLSFEL AEPLHIRQVD INPQIVFSYI KSKGNLSLNN GYEESNTGDN
660 670 680 690 700
QVVYNGNLVS YDSVPVADFN NPLKISLNMD FTHQPSGLVW ANTLAWQEAR
710 720 730 740 750
KARIILGKTN AQYISEYSDY KQYVDEKLDS SLTWDTRLSW TPQFLQQQNL
760 770 780 790
TISADILNVL DSKTAVDTTN TGVATYASGR TFWLDVSMKF
Length:790
Mass (Da):89,283
Last modified:November 1, 1997 - v2
Checksum:i907735A2A124E674
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti1 – 22MKRVL…QAVDD → MT (PubMed:9116051).CuratedAdd BLAST22
Sequence conflicti279 – 289TWFASDRFTHD → YLVCQRPLYPR in CAA50733 (PubMed:9116051).CuratedAdd BLAST11
Sequence conflicti503A → T in CAA50733 (PubMed:9116051).Curated1
Sequence conflicti534 – 545TLTRY…LKTPY → NSDALSGFE in CAA50733 (PubMed:9116051).CuratedAdd BLAST12
Sequence conflicti573 – 574HD → LV in CAA50733 (PubMed:9116051).Curated2
Sequence conflicti615 – 616HI → LY in CAA50733 (PubMed:9116051).Curated2

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X71917 Genomic DNA Translation: CAA50733.1
U00096 Genomic DNA Translation: AAC74568.1
AP009048 Genomic DNA Translation: BAA15166.1
PIRiB64903
RefSeqiNP_416012.1, NC_000913.3
WP_000832437.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74568; AAC74568; b1495
BAA15166; BAA15166; BAA15166
GeneIDi945961
KEGGiecj:JW1490
eco:b1495
PATRICifig|1411691.4.peg.771

Similar proteinsi

Entry informationi

Entry nameiYDDB_ECOLI
AccessioniPrimary (citable) accession number: P31827
Secondary accession number(s): P77572
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: November 1, 1997
Last modified: March 28, 2018
This is version 112 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health