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Protein

Competence protein F

Gene

comF

Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in transformation (competence for DNA uptake).

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Competence

Names & Taxonomyi

Protein namesi
Recommended name:
Competence protein F
Alternative name(s):
DNA transformation protein ComF
Protein COM101A
Gene namesi
Name:comF
Ordered Locus Names:HI_0434
OrganismiHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Taxonomic identifieri71421 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
Proteomesi
  • UP000000579 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002094561 – 229Competence protein FAdd BLAST229

Interactioni

Protein-protein interaction databases

STRINGi71421.HI0434.

Structurei

3D structure databases

ProteinModelPortaliP31773.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi9 – 54Cys-richAdd BLAST46

Sequence similaritiesi

Belongs to the ComF/GntX family.Curated

Phylogenomic databases

eggNOGiENOG4105MJ2. Bacteria.
COG1040. LUCA.
OMAiLARWLGC.
PhylomeDBiP31773.

Family and domain databases

CDDicd06223. PRTases_typeI. 1 hit.
Gene3Di3.40.50.2020. 1 hit.
InterProiIPR005222. Competence_ComF.
IPR000836. PRibTrfase_dom.
IPR029057. PRTase-like.
[Graphical view]
PfamiPF00156. Pribosyltran. 1 hit.
[Graphical view]
SUPFAMiSSF53271. SSF53271. 1 hit.
TIGRFAMsiTIGR00201. comF. 1 hit.

Sequencei

Sequence statusi: Complete.

P31773-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMNFFNFRCI HCRGNLHIAK NGLCSGCQKQ IKSFPYCGHC GSELQYYAQH
60 70 80 90 100
CGNCLKQEPS WDKMVIIGHY IEPLSILIQR FKFQNQFWID RTLARLLYLA
110 120 130 140 150
VRDAKRTHQL KLPEAIIPVP LYHFRQWRRG YNQADLLSQQ LSRWLDIPNL
160 170 180 190 200
NNIVKRVKHT YTQRGLSAKD RRQNLKNAFS LAVSKNEFPY RRVALVDDVI
210 220
TTGSTLNEIS KLLRKLGVEE IQVWGLARA
Length:229
Mass (Da):26,791
Last modified:July 1, 1993 - v1
Checksum:i2F5B72B6C8C79503
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M62809 Genomic DNA. Translation: AAA25014.1.
M59751 Genomic DNA. Translation: AAA24949.1.
L42023 Genomic DNA. Translation: AAC22093.1.
PIRiJH0435.
RefSeqiNP_438595.1. NC_000907.1.
WP_005693729.1. NC_000907.1.

Genome annotation databases

EnsemblBacteriaiAAC22093; AAC22093; HI_0434.
GeneIDi950316.
KEGGihin:HI0434.
PATRICi20189421. VBIHaeInf48452_0454.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M62809 Genomic DNA. Translation: AAA25014.1.
M59751 Genomic DNA. Translation: AAA24949.1.
L42023 Genomic DNA. Translation: AAC22093.1.
PIRiJH0435.
RefSeqiNP_438595.1. NC_000907.1.
WP_005693729.1. NC_000907.1.

3D structure databases

ProteinModelPortaliP31773.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi71421.HI0434.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC22093; AAC22093; HI_0434.
GeneIDi950316.
KEGGihin:HI0434.
PATRICi20189421. VBIHaeInf48452_0454.

Phylogenomic databases

eggNOGiENOG4105MJ2. Bacteria.
COG1040. LUCA.
OMAiLARWLGC.
PhylomeDBiP31773.

Family and domain databases

CDDicd06223. PRTases_typeI. 1 hit.
Gene3Di3.40.50.2020. 1 hit.
InterProiIPR005222. Competence_ComF.
IPR000836. PRibTrfase_dom.
IPR029057. PRTase-like.
[Graphical view]
PfamiPF00156. Pribosyltran. 1 hit.
[Graphical view]
SUPFAMiSSF53271. SSF53271. 1 hit.
TIGRFAMsiTIGR00201. comF. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiCOMF_HAEIN
AccessioniPrimary (citable) accession number: P31773
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: July 1, 1993
Last modified: September 7, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Haemophilus influenzae
    Haemophilus influenzae (strain Rd): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.