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P31773 (COMF_HAEIN) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Competence protein F
Alternative name(s):
DNA transformation protein ComF
Protein COM101A
Gene names
Name:comF
Ordered Locus Names:HI_0434
OrganismHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) [Reference proteome] [HAMAP]
Taxonomic identifier71421 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus

Protein attributes

Sequence length229 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in transformation (competence for DNA uptake).

Sequence similarities

Belongs to the ComF/GntX family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 229229Competence protein F
PRO_0000209456

Regions

Compositional bias9 – 5446Cys-rich

Sequences

Sequence LengthMass (Da)Tools
P31773 [UniParc].

Last modified July 1, 1993. Version 1.
Checksum: 2F5B72B6C8C79503

FASTA22926,791
        10         20         30         40         50         60 
MMNFFNFRCI HCRGNLHIAK NGLCSGCQKQ IKSFPYCGHC GSELQYYAQH CGNCLKQEPS 

        70         80         90        100        110        120 
WDKMVIIGHY IEPLSILIQR FKFQNQFWID RTLARLLYLA VRDAKRTHQL KLPEAIIPVP 

       130        140        150        160        170        180 
LYHFRQWRRG YNQADLLSQQ LSRWLDIPNL NNIVKRVKHT YTQRGLSAKD RRQNLKNAFS 

       190        200        210        220 
LAVSKNEFPY RRVALVDDVI TTGSTLNEIS KLLRKLGVEE IQVWGLARA 

« Hide

References

« Hide 'large scale' references
[1]"Nucleotide sequence of a cluster of genes involved in the transformation of Haemophilus influenzae Rd."
Tomb J.-F., El-Hajj H., Smith H.O.
Gene 104:1-10(1991) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 51907 / DSM 11121 / KW20 / Rd.
[2]"Sequence and transcriptional regulation of com101A, a locus required for genetic transformation in Haemophilus influenzae."
Larson T.G., Goodgal S.H.
J. Bacteriol. 173:4683-4691(1991) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[3]"Whole-genome random sequencing and assembly of Haemophilus influenzae Rd."
Fleischmann R.D., Adams M.D., White O., Clayton R.A., Kirkness E.F., Kerlavage A.R., Bult C.J., Tomb J.-F., Dougherty B.A., Merrick J.M., McKenney K., Sutton G.G., FitzHugh W., Fields C.A., Gocayne J.D., Scott J.D., Shirley R., Liu L.-I. expand/collapse author list , Glodek A., Kelley J.M., Weidman J.F., Phillips C.A., Spriggs T., Hedblom E., Cotton M.D., Utterback T.R., Hanna M.C., Nguyen D.T., Saudek D.M., Brandon R.C., Fine L.D., Fritchman J.L., Fuhrmann J.L., Geoghagen N.S.M., Gnehm C.L., McDonald L.A., Small K.V., Fraser C.M., Smith H.O., Venter J.C.
Science 269:496-512(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51907 / DSM 11121 / KW20 / Rd.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
M62809 Genomic DNA. Translation: AAA25014.1.
M59751 Genomic DNA. Translation: AAA24949.1.
L42023 Genomic DNA. Translation: AAC22093.1.
PIRJH0435.
RefSeqNP_438595.1. NC_000907.1.

3D structure databases

ProteinModelPortalP31773.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING71421.HI0434.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC22093; AAC22093; HI_0434.
GeneID950316.
KEGGhin:HI0434.
PATRIC20189421. VBIHaeInf48452_0454.

Phylogenomic databases

eggNOGCOG1040.
OMALARWLGC.
OrthoDBEOG6716R8.
ProtClustDBCLSK870528.

Family and domain databases

InterProIPR005222. Competence_ComF.
IPR000836. PRibTrfase_dom.
[Graphical view]
PfamPF00156. Pribosyltran. 1 hit.
[Graphical view]
TIGRFAMsTIGR00201. comF. 1 hit.
ProtoNetSearch...

Entry information

Entry nameCOMF_HAEIN
AccessionPrimary (citable) accession number: P31773
Entry history
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: July 1, 1993
Last modified: November 13, 2013
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Haemophilus influenzae

Haemophilus influenzae (strain Rd): entries and gene names