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Protein

Putative metabolite transport protein YaaU

Gene

yaaU

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

  • response to oxidative stress Source: EcoCyc
Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciEcoCyc:YAAU-MONOMER.
ECOL316407:JW0044-MONOMER.

Protein family/group databases

TCDBi2.A.1.1.114. the major facilitator superfamily (mfs).

Names & Taxonomyi

Protein namesi
Recommended name:
Putative metabolite transport protein YaaU
Gene namesi
Name:yaaU
Synonyms:yabE
Ordered Locus Names:b0045, JW0044
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11566. yaaU.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 1818CytoplasmicSequence analysisAdd
BLAST
Transmembranei19 – 3921Helical; Name=1Sequence analysisAdd
BLAST
Topological domaini40 – 5314PeriplasmicSequence analysisAdd
BLAST
Transmembranei54 – 7421Helical; Name=2Sequence analysisAdd
BLAST
Topological domaini75 – 8410CytoplasmicSequence analysis
Transmembranei85 – 10521Helical; Name=3Sequence analysisAdd
BLAST
Topological domaini106 – 1138PeriplasmicSequence analysis
Transmembranei114 – 13421Helical; Name=4Sequence analysisAdd
BLAST
Topological domaini135 – 14511CytoplasmicSequence analysisAdd
BLAST
Transmembranei146 – 16621Helical; Name=5Sequence analysisAdd
BLAST
Topological domaini167 – 1737PeriplasmicSequence analysis
Transmembranei174 – 19421Helical; Name=6Sequence analysisAdd
BLAST
Topological domaini195 – 24147CytoplasmicSequence analysisAdd
BLAST
Transmembranei242 – 26221Helical; Name=7Sequence analysisAdd
BLAST
Topological domaini263 – 28220PeriplasmicSequence analysisAdd
BLAST
Transmembranei283 – 30321Helical; Name=8Sequence analysisAdd
BLAST
Topological domaini304 – 3096CytoplasmicSequence analysis
Transmembranei310 – 32920Helical; Name=9Sequence analysisAdd
BLAST
Topological domaini330 – 3345PeriplasmicSequence analysis
Transmembranei335 – 35723Helical; Name=10Sequence analysisAdd
BLAST
Topological domaini358 – 37316CytoplasmicSequence analysisAdd
BLAST
Transmembranei374 – 39421Helical; Name=11Sequence analysisAdd
BLAST
Topological domaini395 – 4017PeriplasmicSequence analysis
Transmembranei402 – 42221Helical; Name=12Sequence analysisAdd
BLAST
Topological domaini423 – 44321CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 443443Putative metabolite transport protein YaaUPRO_0000050481Add
BLAST

Proteomic databases

PaxDbiP31679.

Interactioni

Protein-protein interaction databases

BioGridi4262202. 172 interactions.
STRINGi511145.b0045.

Structurei

3D structure databases

ProteinModelPortaliP31679.
SMRiP31679. Positions 36-426.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105C54. Bacteria.
ENOG410XQKC. LUCA.
HOGENOMiHOG000077075.
InParanoidiP31679.
KOiK08368.
OMAiCLVIPSQ.
OrthoDBiEOG6SJJKM.
PhylomeDBiP31679.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P31679-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQPSRNFDDL KFSSIHRRIL LWGSGGPFLD GYVLVMIGVA LEQLTPALKL
60 70 80 90 100
DADWIGLLGA GTLAGLFVGT SLFGYISDKV GRRKMFLIDI IAIGVISVAT
110 120 130 140 150
MFVSSPVELL VMRVLIGIVI GADYPIATSM ITEFSSTRQR AFSISFIAAM
160 170 180 190 200
WYVGATCADL VGYWLYDVEG GWRWMLGSAA IPCLLILIGR FELPESPRWL
210 220 230 240 250
LRKGRVKECE EMMIKLFGEP VAFDEEQPQQ TRFRDLFNRR HFPFVLFVAA
260 270 280 290 300
IWTCQVIPMF AIYTFGPQIV GLLGLGVGKN AALGNVVISL FFMLGCIPPM
310 320 330 340 350
LWLNTAGRRP LLIGSFAMMT LALAVLGLIP DMGIWLVVMA FAVYAFFSGG
360 370 380 390 400
PGNLQWLYPN ELFPTDIRAS AVGVIMSLSR IGTIVSTWAL PIFINNYGIS
410 420 430 440
NTMLMGAGIS LFGLLISVAF APETRGMSLA QTSNMTIRGQ RMG
Length:443
Mass (Da):48,667
Last modified:November 1, 1997 - v2
Checksum:iAEF484D8B109DE05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73156.1.
AP009048 Genomic DNA. Translation: BAB96613.2.
PIRiE64725.
RefSeqiNP_414587.1. NC_000913.3.
WP_001183198.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73156; AAC73156; b0045.
BAB96613; BAB96613; BAB96613.
GeneIDi944766.
KEGGiecj:JW0044.
eco:b0045.
PATRICi32115189. VBIEscCol129921_0046.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73156.1.
AP009048 Genomic DNA. Translation: BAB96613.2.
PIRiE64725.
RefSeqiNP_414587.1. NC_000913.3.
WP_001183198.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP31679.
SMRiP31679. Positions 36-426.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262202. 172 interactions.
STRINGi511145.b0045.

Protein family/group databases

TCDBi2.A.1.1.114. the major facilitator superfamily (mfs).

Proteomic databases

PaxDbiP31679.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73156; AAC73156; b0045.
BAB96613; BAB96613; BAB96613.
GeneIDi944766.
KEGGiecj:JW0044.
eco:b0045.
PATRICi32115189. VBIEscCol129921_0046.

Organism-specific databases

EchoBASEiEB1527.
EcoGeneiEG11566. yaaU.

Phylogenomic databases

eggNOGiENOG4105C54. Bacteria.
ENOG410XQKC. LUCA.
HOGENOMiHOG000077075.
InParanoidiP31679.
KOiK08368.
OMAiCLVIPSQ.
OrthoDBiEOG6SJJKM.
PhylomeDBiP31679.

Enzyme and pathway databases

BioCyciEcoCyc:YAAU-MONOMER.
ECOL316407:JW0044-MONOMER.

Miscellaneous databases

PROiP31679.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region."
    Yura T., Mori H., Nagai H., Nagata T., Ishihama A., Fujita N., Isono K., Mizobuchi K., Nakata A.
    Nucleic Acids Res. 20:3305-3308(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], SEQUENCE REVISION.
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYAAU_ECOLI
AccessioniPrimary (citable) accession number: P31679
Secondary accession number(s): P31578, P75628
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: November 1, 1997
Last modified: January 20, 2016
This is version 130 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.