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Protein

Uncharacterized protein YadD

Gene

yadD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11748-MONOMER.
ECOL316407:JW5010-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YadD
Gene namesi
Name:yadD
Ordered Locus Names:b0132, JW5010
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11748. yadD.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001685261 – 300Uncharacterized protein YadDAdd BLAST300

Proteomic databases

PaxDbiP31665.
PRIDEiP31665.

Interactioni

Protein-protein interaction databases

BioGridi4260707. 246 interactors.
STRINGi511145.b0132.

Structurei

3D structure databases

ProteinModelPortaliP31665.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the YadD/YfaD/YhgA/YjiP family.Curated

Phylogenomic databases

eggNOGiENOG4108A32. Bacteria.
COG5464. LUCA.
HOGENOMiHOG000116866.
InParanoidiP31665.
OMAiRVYNNPF.
PhylomeDBiP31665.

Family and domain databases

InterProiIPR010106. CHP01784.
IPR006842. Transposase_31.
[Graphical view]
PfamiPF04754. Transposase_31. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01784. T_den_put_tspse. 1 hit.

Sequencei

Sequence statusi: Complete.

P31665-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDAPSTTPHD AVFKQFLMHA ETARDFLEIH LPVELRELCD LNTLHLESGS
60 70 80 90 100
FIEESLKGHS TDVLYSVQMQ GNPGYLHVVI EHQSKPDKKM AFRMMRYSIA
110 120 130 140 150
AMHRHLEADH DKLPLVVPIL FYQGEATPYP LSMCWFDMFY SPELARRVYN
160 170 180 190 200
SPFPLVDITI TPDDEIMQHR RIAILELLQK HIRQRDLMLL LEQLVTLIDE
210 220 230 240 250
GYTSGSQLVA MQNYMLQRGH TEQADLFYGV LRDRETGGES MMTLAQWFEE
260 270 280 290 300
KGIEKGIQQG RQEVSQEFAQ RLLSKGMSRE DVAEMANLPL AEIDKVINLI
Length:300
Mass (Da):34,607
Last modified:November 1, 1997 - v2
Checksum:iF551985238862C65
GO

Sequence cautioni

The sequence AAA24273 differs from that shown. Reason: Frameshift at position 17.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti244L → V (PubMed:8202364).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L17086 Genomic DNA. Translation: AAA24273.1. Frameshift.
U00096 Genomic DNA. Translation: AAC73243.1.
AP009048 Genomic DNA. Translation: BAB96710.2.
PIRiD64736.
RefSeqiNP_414674.1. NC_000913.3.
WP_000339954.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73243; AAC73243; b0132.
BAB96710; BAB96710; BAB96710.
GeneIDi944781.
KEGGiecj:JW5010.
eco:b0132.
PATRICi32115369. VBIEscCol129921_0136.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L17086 Genomic DNA. Translation: AAA24273.1. Frameshift.
U00096 Genomic DNA. Translation: AAC73243.1.
AP009048 Genomic DNA. Translation: BAB96710.2.
PIRiD64736.
RefSeqiNP_414674.1. NC_000913.3.
WP_000339954.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP31665.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260707. 246 interactors.
STRINGi511145.b0132.

Proteomic databases

PaxDbiP31665.
PRIDEiP31665.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73243; AAC73243; b0132.
BAB96710; BAB96710; BAB96710.
GeneIDi944781.
KEGGiecj:JW5010.
eco:b0132.
PATRICi32115369. VBIEscCol129921_0136.

Organism-specific databases

EchoBASEiEB1698.
EcoGeneiEG11748. yadD.

Phylogenomic databases

eggNOGiENOG4108A32. Bacteria.
COG5464. LUCA.
HOGENOMiHOG000116866.
InParanoidiP31665.
OMAiRVYNNPF.
PhylomeDBiP31665.

Enzyme and pathway databases

BioCyciEcoCyc:EG11748-MONOMER.
ECOL316407:JW5010-MONOMER.

Miscellaneous databases

PROiP31665.

Family and domain databases

InterProiIPR010106. CHP01784.
IPR006842. Transposase_31.
[Graphical view]
PfamiPF04754. Transposase_31. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01784. T_den_put_tspse. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYADD_ECOLI
AccessioniPrimary (citable) accession number: P31665
Secondary accession number(s): P75660, Q8KJQ2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: November 1, 1997
Last modified: November 30, 2016
This is version 115 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.