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Protein

Uncharacterized protein YidR

Gene

yidR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11713-MONOMER.
ECOL316407:JW5860-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YidR
Gene namesi
Name:yidR
Ordered Locus Names:b3689, JW5860
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11713. yidR.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001696331 – 415Uncharacterized protein YidRAdd BLAST415

Proteomic databases

PaxDbiP31455.
PRIDEiP31455.

Interactioni

Protein-protein interaction databases

BioGridi4262576. 2 interactors.
DIPiDIP-12454N.
STRINGi511145.b3689.

Structurei

3D structure databases

ProteinModelPortaliP31455.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105D99. Bacteria.
ENOG410XQ17. LUCA.
HOGENOMiHOG000126359.
InParanoidiP31455.

Family and domain databases

Gene3Di2.120.10.30. 2 hits.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR022223. DUF3748.
IPR011659. PD40.
[Graphical view]
PfamiPF12566. DUF3748. 1 hit.
PF07676. PD40. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P31455-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGPVLYQDR AMKQITFAPR NHLLTNTNTW TPDSQWLVFD VRPSGASFTG
60 70 80 90 100
ETIERVNIHT GEVEVIYRAS QGAHVGVVTV HPKSEKYVFI HGPENPDETW
110 120 130 140 150
HYDFHHRRGV IVEGGKMSNL DAMDITAPYT PGVLRGGSHV HVFSPNGERV
160 170 180 190 200
SFTYNDHVMH ELDPALDLRN VGVAAPFGPV NVQKQHPREY SGSHWCVLVS
210 220 230 240 250
KTTPTPQPGS DEINRAYEEG WVGNHALAFI GDTLSPKGEK VPELFIVELP
260 270 280 290 300
QDEAGWKAAG DAPLSGTETT LPAPPRGVVQ RRLTFTHHRA YPGLVNVPRH
310 320 330 340 350
WVRCNPQGTQ IAFLMRDDNG IVQLWLISPQ GGEPRQLTHN KTDIQSAFNW
360 370 380 390 400
HPSGEWLGFV LDNRIACAHA QSGEVEYLTE HHANSPSADA VVFSPDGQWL
410
AWMEGGQLWI TETDR
Length:415
Mass (Da):46,187
Last modified:November 30, 2010 - v4
Checksum:iEE27833151156B07
GO

Sequence cautioni

The sequence AAA62041 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated
The sequence BAE77605 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L10328 Genomic DNA. Translation: AAA62041.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76712.3.
AP009048 Genomic DNA. Translation: BAE77605.1. Different initiation.
PIRiB65171.
RefSeqiNP_418144.3. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC76712; AAC76712; b3689.
BAE77605; BAE77605; BAE77605.
GeneIDi948198.
KEGGiecj:JW5860.
eco:b3689.
PATRICi32122873. VBIEscCol129921_3812.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L10328 Genomic DNA. Translation: AAA62041.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76712.3.
AP009048 Genomic DNA. Translation: BAE77605.1. Different initiation.
PIRiB65171.
RefSeqiNP_418144.3. NC_000913.3.

3D structure databases

ProteinModelPortaliP31455.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262576. 2 interactors.
DIPiDIP-12454N.
STRINGi511145.b3689.

Proteomic databases

PaxDbiP31455.
PRIDEiP31455.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76712; AAC76712; b3689.
BAE77605; BAE77605; BAE77605.
GeneIDi948198.
KEGGiecj:JW5860.
eco:b3689.
PATRICi32122873. VBIEscCol129921_3812.

Organism-specific databases

EchoBASEiEB1664.
EcoGeneiEG11713. yidR.

Phylogenomic databases

eggNOGiENOG4105D99. Bacteria.
ENOG410XQ17. LUCA.
HOGENOMiHOG000126359.
InParanoidiP31455.

Enzyme and pathway databases

BioCyciEcoCyc:EG11713-MONOMER.
ECOL316407:JW5860-MONOMER.

Miscellaneous databases

PROiP31455.

Family and domain databases

Gene3Di2.120.10.30. 2 hits.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR022223. DUF3748.
IPR011659. PD40.
[Graphical view]
PfamiPF12566. DUF3748. 1 hit.
PF07676. PD40. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYIDR_ECOLI
AccessioniPrimary (citable) accession number: P31455
Secondary accession number(s): P76734, Q2M801
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: November 30, 2010
Last modified: November 2, 2016
This is version 105 of the entry and version 4 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.