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Protein

Uncharacterized HTH-type transcriptional regulator YidP

Gene

yidP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi28 – 47H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

  • transcription, DNA-templated Source: EcoCyc

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:EG11711-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YidP
Gene namesi
Name:yidP
Ordered Locus Names:b3684, JW3661
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11711 yidP

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000506811 – 238Uncharacterized HTH-type transcriptional regulator YidPAdd BLAST238

Proteomic databases

PaxDbiP31453
PRIDEiP31453

Interactioni

Protein-protein interaction databases

BioGridi426080610 interactors.
IntActiP31453 1 interactor.
STRINGi316385.ECDH10B_3870

Structurei

3D structure databases

ProteinModelPortaliP31453
SMRiP31453
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 68HTH gntR-typePROSITE-ProRule annotationAdd BLAST68

Phylogenomic databases

eggNOGiENOG4105FDP Bacteria
COG2188 LUCA
HOGENOMiHOG000228717
InParanoidiP31453
KOiK03482
OMAiDRYKFVA
PhylomeDBiP31453

Family and domain databases

CDDicd07377 WHTH_GntR, 1 hit
Gene3Di1.10.10.101 hit
3.40.1410.101 hit
InterProiView protein in InterPro
IPR028978 Chorismate_lyase_/UTRA_dom_sf
IPR000524 Tscrpt_reg_HTH_GntR
IPR011663 UTRA
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00392 GntR, 1 hit
PF07702 UTRA, 1 hit
PRINTSiPR00035 HTHGNTR
SMARTiView protein in SMART
SM00345 HTH_GNTR, 1 hit
SM00866 UTRA, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
SSF64288 SSF64288, 1 hit
PROSITEiView protein in PROSITE
PS50949 HTH_GNTR, 1 hit

Sequencei

Sequence statusi: Complete.

P31453-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIYKSIAERL RIRLNSADFT LNSLLPGEKK LAEEFAVSRM TIRKAIDLLV
60 70 80 90 100
AWGLVVRRHG SGTYLVRKDV LHQTASLTGL VEVLKRQGKT VTSQVLIFEI
110 120 130 140 150
MPAPPAIASQ LRIQINEQIY FSRRVRFVEG KPLMLEDSYM PVKLFRNLSL
160 170 180 190 200
QHLEGSKFEY IEQECGILIG GNYESLTPVL ADRLLARQMK VAEHTPLLRI
210 220 230
TSLSYSESGE FLNYSVMFRN ASEYQVEYHL RRLHPEKS
Length:238
Mass (Da):27,328
Last modified:July 1, 1993 - v1
Checksum:i565A83569D052893
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L10328 Genomic DNA Translation: AAA62036.1
U00096 Genomic DNA Translation: AAC76707.1
AP009048 Genomic DNA Translation: BAE77610.1
PIRiE65170
RefSeqiNP_418139.1, NC_000913.3
WP_001300779.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC76707; AAC76707; b3684
BAE77610; BAE77610; BAE77610
GeneIDi948194
KEGGiecj:JW3661
eco:b3684
PATRICifig|511145.12.peg.3806

Similar proteinsi

Entry informationi

Entry nameiYIDP_ECOLI
AccessioniPrimary (citable) accession number: P31453
Secondary accession number(s): Q2M7Z6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: July 1, 1993
Last modified: March 28, 2018
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome