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P31448

- YIDK_ECOLI

UniProt

P31448 - YIDK_ECOLI

Protein

Uncharacterized symporter YidK

Gene

yidK

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 118 (01 Oct 2014)
      Sequence version 1 (01 Jul 1993)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. symporter activity Source: UniProtKB-KW

    GO - Biological processi

    1. sodium ion transport Source: UniProtKB-KW

    Keywords - Biological processi

    Ion transport, Sodium transport, Symport, Transport

    Keywords - Ligandi

    Sodium

    Enzyme and pathway databases

    BioCyciEcoCyc:YIDK-MONOMER.
    ECOL316407:JW3655-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized symporter YidK
    Gene namesi
    Name:yidK
    Ordered Locus Names:b3679, JW3655
    OrganismiEscherichia coli (strain K12)
    Taxonomic identifieri83333 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

    Organism-specific databases

    EcoGeneiEG11706. yidK.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 571571Uncharacterized symporter YidKPRO_0000105406Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriP31448.

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-12450N.
    IntActiP31448. 5 interactions.
    MINTiMINT-1256907.
    STRINGi511145.b3679.

    Structurei

    3D structure databases

    ProteinModelPortaliP31448.
    SMRiP31448. Positions 41-456.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 33CytoplasmicSequence Analysis
    Topological domaini25 – 7450PeriplasmicSequence AnalysisAdd
    BLAST
    Topological domaini96 – 11823CytoplasmicSequence AnalysisAdd
    BLAST
    Topological domaini140 – 16223PeriplasmicSequence AnalysisAdd
    BLAST
    Topological domaini184 – 1918CytoplasmicSequence Analysis
    Topological domaini213 – 24028PeriplasmicSequence AnalysisAdd
    BLAST
    Topological domaini262 – 28322CytoplasmicSequence AnalysisAdd
    BLAST
    Topological domaini305 – 32420PeriplasmicSequence AnalysisAdd
    BLAST
    Topological domaini346 – 38035CytoplasmicSequence AnalysisAdd
    BLAST
    Topological domaini402 – 41514PeriplasmicSequence AnalysisAdd
    BLAST
    Topological domaini437 – 4371CytoplasmicSequence Analysis
    Topological domaini459 – 4602PeriplasmicSequence Analysis
    Topological domaini482 – 50524CytoplasmicSequence AnalysisAdd
    BLAST
    Topological domaini527 – 5326PeriplasmicSequence Analysis
    Topological domaini554 – 57118CytoplasmicSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei4 – 2421HelicalSequence AnalysisAdd
    BLAST
    Transmembranei75 – 9521HelicalSequence AnalysisAdd
    BLAST
    Transmembranei119 – 13921HelicalSequence AnalysisAdd
    BLAST
    Transmembranei163 – 18321HelicalSequence AnalysisAdd
    BLAST
    Transmembranei192 – 21221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei241 – 26121HelicalSequence AnalysisAdd
    BLAST
    Transmembranei284 – 30421HelicalSequence AnalysisAdd
    BLAST
    Transmembranei325 – 34521HelicalSequence AnalysisAdd
    BLAST
    Transmembranei381 – 40121HelicalSequence AnalysisAdd
    BLAST
    Transmembranei416 – 43621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei438 – 45821HelicalSequence AnalysisAdd
    BLAST
    Transmembranei461 – 48121HelicalSequence AnalysisAdd
    BLAST
    Transmembranei506 – 52621HelicalSequence AnalysisAdd
    BLAST
    Transmembranei533 – 55321HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG4146.
    HOGENOMiHOG000025424.
    KOiK03307.
    OMAiMLMIGFI.
    OrthoDBiEOG6MSS23.
    PhylomeDBiP31448.

    Family and domain databases

    InterProiIPR001734. Na/solute_symporter.
    IPR018212. Na/solute_symporter_CS.
    IPR019900. Na/solute_symporter_subgr.
    [Graphical view]
    PANTHERiPTHR11819. PTHR11819. 1 hit.
    PfamiPF00474. SSF. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00813. sss. 1 hit.
    PROSITEiPS00456. NA_SOLUT_SYMP_1. 1 hit.
    PS50283. NA_SOLUT_SYMP_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P31448-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNSLQILSFV GFTLLVAVIT WWKVRKTDTG SQQGYFLAGR SLKAPVIAAS    50
    LMLTNLSTEQ LVGLSGQAYK SGMSVMGWEV TSAVTLIFLA LIFLPRYLKR 100
    GIATIPDFLE ERYDKTTRII IDFCFLIATG VCFLPIVLYS GALALNSLFH 150
    VGESLQISHG AAIWLLVILL GLAGILYAVI GGLRAMAVAD SINGIGLVIG 200
    GLMVPVFGLI AMGKGSFMQG IEQLTTVHAE KLNSIGGPTD PLPIGAAFTG 250
    LILVNTFYWC TNQGIVQRTL ASKSLAEGQK GALLTAVLKM LDPLVLVLPG 300
    LIAFHLYQDL PKADMAYPTL VNNVLPVPMV GFFGAVLFGA VISTFNGFLN 350
    SASTLFSMGI YRRIINQNAE PQQLVTVGRK FGFFIAIVSV LVAPWIANAP 400
    QGLYSWMKQL NGIYNVPLVT IIIMGFFFPR IPALAAKVAM GIGIISYITI 450
    NYLVKFDFHF LYVLACTFCI NVVVMLVIGF IKPRATPFTF KDAFAVDMKP 500
    WKNVKIASIG ILFAMIGVYA GLAEFGGYGT RWLAMISYFI AAVVIVYLIF 550
    DSWRHRHDPA VTFTPDGKDS L 571
    Length:571
    Mass (Da):62,085
    Last modified:July 1, 1993 - v1
    Checksum:i486AB89A6A2EACCF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L10328 Genomic DNA. Translation: AAA62031.1.
    U00096 Genomic DNA. Translation: AAC76702.1.
    AP009048 Genomic DNA. Translation: BAE77614.1.
    PIRiH65169.
    RefSeqiNP_418135.1. NC_000913.3.
    YP_491755.1. NC_007779.1.

    Genome annotation databases

    EnsemblBacteriaiAAC76702; AAC76702; b3679.
    BAE77614; BAE77614; BAE77614.
    GeneIDi12932458.
    948185.
    KEGGiecj:Y75_p3495.
    eco:b3679.
    PATRICi32122849. VBIEscCol129921_3800.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L10328 Genomic DNA. Translation: AAA62031.1 .
    U00096 Genomic DNA. Translation: AAC76702.1 .
    AP009048 Genomic DNA. Translation: BAE77614.1 .
    PIRi H65169.
    RefSeqi NP_418135.1. NC_000913.3.
    YP_491755.1. NC_007779.1.

    3D structure databases

    ProteinModelPortali P31448.
    SMRi P31448. Positions 41-456.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-12450N.
    IntActi P31448. 5 interactions.
    MINTi MINT-1256907.
    STRINGi 511145.b3679.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC76702 ; AAC76702 ; b3679 .
    BAE77614 ; BAE77614 ; BAE77614 .
    GeneIDi 12932458.
    948185.
    KEGGi ecj:Y75_p3495.
    eco:b3679.
    PATRICi 32122849. VBIEscCol129921_3800.

    Organism-specific databases

    EchoBASEi EB1657.
    EcoGenei EG11706. yidK.

    Phylogenomic databases

    eggNOGi COG4146.
    HOGENOMi HOG000025424.
    KOi K03307.
    OMAi MLMIGFI.
    OrthoDBi EOG6MSS23.
    PhylomeDBi P31448.

    Enzyme and pathway databases

    BioCyci EcoCyc:YIDK-MONOMER.
    ECOL316407:JW3655-MONOMER.

    Miscellaneous databases

    PROi P31448.

    Gene expression databases

    Genevestigatori P31448.

    Family and domain databases

    InterProi IPR001734. Na/solute_symporter.
    IPR018212. Na/solute_symporter_CS.
    IPR019900. Na/solute_symporter_subgr.
    [Graphical view ]
    PANTHERi PTHR11819. PTHR11819. 1 hit.
    Pfami PF00474. SSF. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00813. sss. 1 hit.
    PROSITEi PS00456. NA_SOLUT_SYMP_1. 1 hit.
    PS50283. NA_SOLUT_SYMP_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication."
      Burland V.D., Plunkett G. III, Daniels D.L., Blattner F.R.
      Genomics 16:551-561(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / MG1655 / ATCC 47076.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / MG1655 / ATCC 47076.
    3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
      Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
      Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
    4. "Global topology analysis of the Escherichia coli inner membrane proteome."
      Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.
      Science 308:1321-1323(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
      Strain: K12 / MG1655 / ATCC 47076.

    Entry informationi

    Entry nameiYIDK_ECOLI
    AccessioniPrimary (citable) accession number: P31448
    Secondary accession number(s): Q2M7Z2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 1, 1993
    Last sequence update: July 1, 1993
    Last modified: October 1, 2014
    This is version 118 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Escherichia coli
      Escherichia coli (strain K12): entries and cross-references to EcoGene
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3