SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P31448

- YIDK_ECOLI

UniProt

P31448 - YIDK_ECOLI

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Uncharacterized symporter YidK
Gene
yidK, b3679, JW3655
Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. symporter activity Source: UniProtKB-KW

GO - Biological processi

  1. sodium ion transport Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Ion transport, Sodium transport, Symport, Transport

Keywords - Ligandi

Sodium

Enzyme and pathway databases

BioCyciEcoCyc:YIDK-MONOMER.
ECOL316407:JW3655-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized symporter YidK
Gene namesi
Name:yidK
Ordered Locus Names:b3679, JW3655
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG11706. yidK.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 33Cytoplasmic Reviewed prediction
Transmembranei4 – 2421Helical; Reviewed prediction
Add
BLAST
Topological domaini25 – 7450Periplasmic Reviewed prediction
Add
BLAST
Transmembranei75 – 9521Helical; Reviewed prediction
Add
BLAST
Topological domaini96 – 11823Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei119 – 13921Helical; Reviewed prediction
Add
BLAST
Topological domaini140 – 16223Periplasmic Reviewed prediction
Add
BLAST
Transmembranei163 – 18321Helical; Reviewed prediction
Add
BLAST
Topological domaini184 – 1918Cytoplasmic Reviewed prediction
Transmembranei192 – 21221Helical; Reviewed prediction
Add
BLAST
Topological domaini213 – 24028Periplasmic Reviewed prediction
Add
BLAST
Transmembranei241 – 26121Helical; Reviewed prediction
Add
BLAST
Topological domaini262 – 28322Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei284 – 30421Helical; Reviewed prediction
Add
BLAST
Topological domaini305 – 32420Periplasmic Reviewed prediction
Add
BLAST
Transmembranei325 – 34521Helical; Reviewed prediction
Add
BLAST
Topological domaini346 – 38035Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei381 – 40121Helical; Reviewed prediction
Add
BLAST
Topological domaini402 – 41514Periplasmic Reviewed prediction
Add
BLAST
Transmembranei416 – 43621Helical; Reviewed prediction
Add
BLAST
Topological domaini437 – 4371Cytoplasmic Reviewed prediction
Transmembranei438 – 45821Helical; Reviewed prediction
Add
BLAST
Topological domaini459 – 4602Periplasmic Reviewed prediction
Transmembranei461 – 48121Helical; Reviewed prediction
Add
BLAST
Topological domaini482 – 50524Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei506 – 52621Helical; Reviewed prediction
Add
BLAST
Topological domaini527 – 5326Periplasmic Reviewed prediction
Transmembranei533 – 55321Helical; Reviewed prediction
Add
BLAST
Topological domaini554 – 57118Cytoplasmic Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 571571Uncharacterized symporter YidK
PRO_0000105406Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriP31448.

Interactioni

Protein-protein interaction databases

DIPiDIP-12450N.
IntActiP31448. 5 interactions.
MINTiMINT-1256907.
STRINGi511145.b3679.

Structurei

3D structure databases

ProteinModelPortaliP31448.
SMRiP31448. Positions 41-456.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG4146.
HOGENOMiHOG000025424.
KOiK03307.
OMAiMLMIGFI.
OrthoDBiEOG6MSS23.
PhylomeDBiP31448.

Family and domain databases

InterProiIPR001734. Na/solute_symporter.
IPR018212. Na/solute_symporter_CS.
IPR019900. Na/solute_symporter_subgr.
[Graphical view]
PANTHERiPTHR11819. PTHR11819. 1 hit.
PfamiPF00474. SSF. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00813. sss. 1 hit.
PROSITEiPS00456. NA_SOLUT_SYMP_1. 1 hit.
PS50283. NA_SOLUT_SYMP_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P31448-1 [UniParc]FASTAAdd to Basket

« Hide

MNSLQILSFV GFTLLVAVIT WWKVRKTDTG SQQGYFLAGR SLKAPVIAAS    50
LMLTNLSTEQ LVGLSGQAYK SGMSVMGWEV TSAVTLIFLA LIFLPRYLKR 100
GIATIPDFLE ERYDKTTRII IDFCFLIATG VCFLPIVLYS GALALNSLFH 150
VGESLQISHG AAIWLLVILL GLAGILYAVI GGLRAMAVAD SINGIGLVIG 200
GLMVPVFGLI AMGKGSFMQG IEQLTTVHAE KLNSIGGPTD PLPIGAAFTG 250
LILVNTFYWC TNQGIVQRTL ASKSLAEGQK GALLTAVLKM LDPLVLVLPG 300
LIAFHLYQDL PKADMAYPTL VNNVLPVPMV GFFGAVLFGA VISTFNGFLN 350
SASTLFSMGI YRRIINQNAE PQQLVTVGRK FGFFIAIVSV LVAPWIANAP 400
QGLYSWMKQL NGIYNVPLVT IIIMGFFFPR IPALAAKVAM GIGIISYITI 450
NYLVKFDFHF LYVLACTFCI NVVVMLVIGF IKPRATPFTF KDAFAVDMKP 500
WKNVKIASIG ILFAMIGVYA GLAEFGGYGT RWLAMISYFI AAVVIVYLIF 550
DSWRHRHDPA VTFTPDGKDS L 571
Length:571
Mass (Da):62,085
Last modified:July 1, 1993 - v1
Checksum:i486AB89A6A2EACCF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L10328 Genomic DNA. Translation: AAA62031.1.
U00096 Genomic DNA. Translation: AAC76702.1.
AP009048 Genomic DNA. Translation: BAE77614.1.
PIRiH65169.
RefSeqiNP_418135.1. NC_000913.3.
YP_491755.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC76702; AAC76702; b3679.
BAE77614; BAE77614; BAE77614.
GeneIDi12932458.
948185.
KEGGiecj:Y75_p3495.
eco:b3679.
PATRICi32122849. VBIEscCol129921_3800.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L10328 Genomic DNA. Translation: AAA62031.1 .
U00096 Genomic DNA. Translation: AAC76702.1 .
AP009048 Genomic DNA. Translation: BAE77614.1 .
PIRi H65169.
RefSeqi NP_418135.1. NC_000913.3.
YP_491755.1. NC_007779.1.

3D structure databases

ProteinModelPortali P31448.
SMRi P31448. Positions 41-456.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-12450N.
IntActi P31448. 5 interactions.
MINTi MINT-1256907.
STRINGi 511145.b3679.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAC76702 ; AAC76702 ; b3679 .
BAE77614 ; BAE77614 ; BAE77614 .
GeneIDi 12932458.
948185.
KEGGi ecj:Y75_p3495.
eco:b3679.
PATRICi 32122849. VBIEscCol129921_3800.

Organism-specific databases

EchoBASEi EB1657.
EcoGenei EG11706. yidK.

Phylogenomic databases

eggNOGi COG4146.
HOGENOMi HOG000025424.
KOi K03307.
OMAi MLMIGFI.
OrthoDBi EOG6MSS23.
PhylomeDBi P31448.

Enzyme and pathway databases

BioCyci EcoCyc:YIDK-MONOMER.
ECOL316407:JW3655-MONOMER.

Miscellaneous databases

PROi P31448.

Gene expression databases

Genevestigatori P31448.

Family and domain databases

InterProi IPR001734. Na/solute_symporter.
IPR018212. Na/solute_symporter_CS.
IPR019900. Na/solute_symporter_subgr.
[Graphical view ]
PANTHERi PTHR11819. PTHR11819. 1 hit.
Pfami PF00474. SSF. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00813. sss. 1 hit.
PROSITEi PS00456. NA_SOLUT_SYMP_1. 1 hit.
PS50283. NA_SOLUT_SYMP_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication."
    Burland V.D., Plunkett G. III, Daniels D.L., Blattner F.R.
    Genomics 16:551-561(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "Global topology analysis of the Escherichia coli inner membrane proteome."
    Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.
    Science 308:1321-1323(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
    Strain: K12 / MG1655 / ATCC 47076.

Entry informationi

Entry nameiYIDK_ECOLI
AccessioniPrimary (citable) accession number: P31448
Secondary accession number(s): Q2M7Z2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: July 1, 1993
Last modified: June 11, 2014
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi