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P31386

- ATS1_YEAST

UniProt

P31386 - ATS1_YEAST

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Protein

Protein ATS1

Gene

ATS1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli

Functioni

May participate in regulatory interactions between microtubules and the cell cycle.

GO - Biological processi

  1. budding cell bud growth Source: SGD
  2. microtubule-based process Source: SGD
  3. microtubule cytoskeleton organization Source: SGD
  4. tRNA wobble uridine modification Source: SGD
Complete GO annotation...

Enzyme and pathway databases

BioCyciYEAST:G3O-28832-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein ATS1
Alternative name(s):
Alpha-tubulin suppressor 1
Gene namesi
Name:ATS1
Ordered Locus Names:YAL020C
ORF Names:FUN28, YAL006
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome I

Organism-specific databases

CYGDiYAL020c.
SGDiS000000018. ATS1.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: SGD
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 333333Protein ATS1PRO_0000206648Add
BLAST

Proteomic databases

MaxQBiP31386.
PaxDbiP31386.
PeptideAtlasiP31386.

Expressioni

Gene expression databases

GenevestigatoriP31386.

Interactioni

Protein-protein interaction databases

BioGridi31746. 91 interactions.
IntActiP31386. 2 interactions.
MINTiMINT-2786397.
STRINGi4932.YAL020C.

Structurei

3D structure databases

ProteinModelPortaliP31386.
SMRiP31386. Positions 4-189.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati1 – 5353RCC1 1Add
BLAST
Repeati55 – 10450RCC1 2Add
BLAST
Repeati146 – 19752RCC1 3Add
BLAST
Repeati286 – 33348RCC1 4Add
BLAST

Sequence similaritiesi

Contains 4 RCC1 repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiCOG5184.
HOGENOMiHOG000163478.
InParanoidiP31386.
KOiK15462.
OMAiCRKGQLG.
OrthoDBiEOG757D8X.

Family and domain databases

Gene3Di2.130.10.30. 2 hits.
InterProiIPR009091. RCC1/BLIP-II.
IPR000408. Reg_chr_condens.
[Graphical view]
PfamiPF00415. RCC1. 1 hit.
[Graphical view]
PRINTSiPR00633. RCCNDNSATION.
SUPFAMiSSF50985. SSF50985. 1 hit.
PROSITEiPS00626. RCC1_2. 1 hit.
PS50012. RCC1_3. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P31386-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSCVYAFGSN GQRQLGLGHD EDMDTPQRSV PGDDGAIVRK IACGGNHSVM
60 70 80 90 100
LTNDGNLVGC GDNRRGELDS AQALRQVHDW RPVEVPAPVV DVACGWDTTV
110 120 130 140 150
IVDADGRVWQ RGGGCYEFTQ QHVPLNSNDE RIAVYGCFQN FVVVQGTRVY
160 170 180 190 200
GWGSNTKCQL QEPKSRSLKE PVLVYDTGSV AVDYVAMGKD FMVIVDEGGR
210 220 230 240 250
IVHASGRLPT GFELKQQQKR HNLVVLCMWT SIHLWNARLN TVESFGRGTH
260 270 280 290 300
SQLFPQERLD FPIVGVATGS EHGILTTANQ EGKSHCYNVY CWGWGEHGNC
310 320 330
GPQKGSQPGL QLVGQYSGKP RVFGGCATTW IVL
Length:333
Mass (Da):36,467
Last modified:July 27, 2011 - v2
Checksum:i3C6F4BE180479096
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti305 – 3051G → A no nucleotide entry (PubMed:8458570)Curated
Sequence conflicti305 – 3051G → A no nucleotide entry (PubMed:8144453)Curated
Sequence conflicti305 – 3051G → A in AAC04937. (PubMed:7731988)Curated
Sequence conflicti305 – 3051G → A no nucleotide entry (PubMed:1561836)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L05146 Genomic DNA. Translation: AAC04937.1.
BK006935 Genomic DNA. Translation: DAA06968.2.
PIRiS36714.
RefSeqiNP_009382.2. NM_001178165.2.

Genome annotation databases

EnsemblFungiiYAL020C; YAL020C; YAL020C.
GeneIDi851213.
KEGGisce:YAL020C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L05146 Genomic DNA. Translation: AAC04937.1 .
BK006935 Genomic DNA. Translation: DAA06968.2 .
PIRi S36714.
RefSeqi NP_009382.2. NM_001178165.2.

3D structure databases

ProteinModelPortali P31386.
SMRi P31386. Positions 4-189.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 31746. 91 interactions.
IntActi P31386. 2 interactions.
MINTi MINT-2786397.
STRINGi 4932.YAL020C.

Proteomic databases

MaxQBi P31386.
PaxDbi P31386.
PeptideAtlasi P31386.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YAL020C ; YAL020C ; YAL020C .
GeneIDi 851213.
KEGGi sce:YAL020C.

Organism-specific databases

CYGDi YAL020c.
SGDi S000000018. ATS1.

Phylogenomic databases

eggNOGi COG5184.
HOGENOMi HOG000163478.
InParanoidi P31386.
KOi K15462.
OMAi CRKGQLG.
OrthoDBi EOG757D8X.

Enzyme and pathway databases

BioCyci YEAST:G3O-28832-MONOMER.

Miscellaneous databases

NextBioi 968094.

Gene expression databases

Genevestigatori P31386.

Family and domain databases

Gene3Di 2.130.10.30. 2 hits.
InterProi IPR009091. RCC1/BLIP-II.
IPR000408. Reg_chr_condens.
[Graphical view ]
Pfami PF00415. RCC1. 1 hit.
[Graphical view ]
PRINTSi PR00633. RCCNDNSATION.
SUPFAMi SSF50985. SSF50985. 1 hit.
PROSITEi PS00626. RCC1_2. 1 hit.
PS50012. RCC1_3. 4 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequencing of chromosome I from Saccharomyces cerevisiae: analysis of a 32 kb region between the LTE1 and SPO7 genes."
    Ouellette B.F.F., Clark M.W., Keng T., Storms R.K., Zhong W.-W., Zeng B., Fortin N., Delaney S., Barton A.B., Kaback D.B., Bussey H.
    Genome 36:32-42(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204511 / S288c / AB972.
  2. "Molecular cloning of chromosome I DNA from Saccharomyces cerevisiae: analysis of the genes in the FUN38-MAK16-SPO7 region."
    Barton A.B., Kaback D.B.
    J. Bacteriol. 176:1872-1880(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204511 / S288c / AB972.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  4. Cited for: GENOME REANNOTATION, SEQUENCE REVISION TO 305.
    Strain: ATCC 204508 / S288c.
  5. "Identification of a Saccharomyces cerevisiae homolog of the SNF2 transcriptional regulator in the DNA sequence of an 8.6 kb region in the LTE1-CYS1 interval on the left arm of chromosome I."
    Clark M.W., Zhong W.-W., Keng T., Storms R.K., Barton A.B., Kaback D.B., Bussey H.
    Yeast 8:133-145(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: PARTIAL NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204511 / S288c / AB972.
  6. "Overexpression of yeast homologs of the mammalian checkpoint gene RCC1 suppresses the class of alpha-tubulin mutations that arrest with excess microtubules."
    Kirkpatrick D., Solomon F.
    Genetics 137:381-392(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: CHARACTERIZATION.

Entry informationi

Entry nameiATS1_YEAST
AccessioniPrimary (citable) accession number: P31386
Secondary accession number(s): D6VPJ8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: July 27, 2011
Last modified: October 29, 2014
This is version 116 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome I
    Yeast (Saccharomyces cerevisiae) chromosome I: entries and gene names

External Data

Dasty 3