Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Outer spore wall protein LDS1

Gene

LDS1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Involved in spore wall assembly.1 Publication

GO - Biological processi

  • ascospore wall assembly Source: SGD
Complete GO annotation...

Keywords - Biological processi

Sporulation

Enzyme and pathway databases

BioCyciYEAST:G3O-28830-MONOMER.

Protein family/group databases

TCDBi2.A.121.2.1. the sulfate transporter (cysz) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Outer spore wall protein LDS11 Publication
Alternative name(s):
Lipid droplets in sporulation protein 11 Publication
Gene namesi
Name:LDS11 Publication
Ordered Locus Names:YAL018CImported
ORF Names:YAL003
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:YAL018C.
SGDiS000000016. LDS1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 9191Cytoplasmic1 PublicationAdd
BLAST
Transmembranei92 – 11221HelicalSequence analysisAdd
BLAST
Topological domaini113 – 1186Extracellular1 Publication
Transmembranei119 – 13921HelicalSequence analysisAdd
BLAST
Topological domaini140 – 20869Cytoplasmic1 PublicationAdd
BLAST
Transmembranei209 – 22921HelicalSequence analysisAdd
BLAST
Topological domaini230 – 26334Extracellular1 PublicationAdd
BLAST
Transmembranei264 – 28421HelicalSequence analysisAdd
BLAST
Topological domaini285 – 32541Cytoplasmic1 PublicationAdd
BLAST

GO - Cellular componenti

  • ascospore wall Source: SGD
  • integral component of membrane Source: UniProtKB-KW
  • lipid particle Source: UniProtKB-SubCell
  • prospore membrane Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Lipid droplet, Membrane

Pathology & Biotechi

Disruption phenotypei

A combined deletion of the LDS proteins RRT8, LDS1 and LDS2 fails to incorporate dityrosine and another yet uncharacterized component in the outer spore wall.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 325325Outer spore wall protein LDS1PRO_0000202413Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi31748. 22 interactions.
DIPiDIP-2881N.
IntActiP31379. 8 interactions.
MINTiMINT-1357567.

Structurei

3D structure databases

ProteinModelPortaliP31379.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the LDS family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

GeneTreeiENSGT00530000069500.
HOGENOMiHOG000074698.
InParanoidiP31379.
OMAiYWATITP.
OrthoDBiEOG75XGWV.

Sequencei

Sequence statusi: Complete.

P31379-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFTGSLALA GIGGLVYKFG GGQSYEKLPY VNIPFNQYLD KVYKKHFSKV
60 70 80 90 100
MSRTRYVLMN FFKDAFTGGA FMYPFKGFLE FNTNKSSYST TMLGILSSYL
110 120 130 140 150
IMFALVSFVY WATITPMYTA FLIVLGPIGL FIAIFHSFLQ ANVFTLLFMR
160 170 180 190 200
LSHFNNHLVE VCLEKNGLEE NLSEVKPIKY YAPINSIYFW AYYFPFKLVK
210 220 230 240 250
YMLGLSVLFV LLVISFFPLI GPILFHILIS PFITQIYFTK VLRLQNFDNI
260 270 280 290 300
QRRENIYLHA GQYASFGFLA GLIESVPILA GFAISTNTIG SVLFNLDHPM
310 320
VPENLVETQA EIEAAPQDIN QQPNQ
Length:325
Mass (Da):37,050
Last modified:July 1, 1993 - v1
Checksum:i1C67C7CCA8B0BAA4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L05146 Genomic DNA. Translation: AAC04939.1.
BK006935 Genomic DNA. Translation: DAA06970.1.
PIRiS36731.
RefSeqiNP_009384.1. NM_001178163.1.

Genome annotation databases

EnsemblFungiiYAL018C; YAL018C; YAL018C.
GeneIDi851215.
KEGGisce:YAL018C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L05146 Genomic DNA. Translation: AAC04939.1.
BK006935 Genomic DNA. Translation: DAA06970.1.
PIRiS36731.
RefSeqiNP_009384.1. NM_001178163.1.

3D structure databases

ProteinModelPortaliP31379.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi31748. 22 interactions.
DIPiDIP-2881N.
IntActiP31379. 8 interactions.
MINTiMINT-1357567.

Protein family/group databases

TCDBi2.A.121.2.1. the sulfate transporter (cysz) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYAL018C; YAL018C; YAL018C.
GeneIDi851215.
KEGGisce:YAL018C.

Organism-specific databases

EuPathDBiFungiDB:YAL018C.
SGDiS000000016. LDS1.

Phylogenomic databases

GeneTreeiENSGT00530000069500.
HOGENOMiHOG000074698.
InParanoidiP31379.
OMAiYWATITP.
OrthoDBiEOG75XGWV.

Enzyme and pathway databases

BioCyciYEAST:G3O-28830-MONOMER.

Miscellaneous databases

PROiP31379.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Identification of a Saccharomyces cerevisiae homolog of the SNF2 transcriptional regulator in the DNA sequence of an 8.6 kb region in the LTE1-CYS1 interval on the left arm of chromosome I."
    Clark M.W., Zhong W.-W., Keng T., Storms R.K., Barton A.B., Kaback D.B., Bussey H.
    Yeast 8:133-145(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204511 / S288c / AB972.
  2. "Sequencing of chromosome I from Saccharomyces cerevisiae: analysis of a 32 kb region between the LTE1 and SPO7 genes."
    Ouellette B.F.F., Clark M.W., Keng T., Storms R.K., Zhong W.-W., Zeng B., Fortin N., Delaney S., Barton A.B., Kaback D.B., Bussey H.
    Genome 36:32-42(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204511 / S288c / AB972.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  4. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  5. "A global topology map of the Saccharomyces cerevisiae membrane proteome."
    Kim H., Melen K., Oesterberg M., von Heijne G.
    Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
    Strain: ATCC 208353 / W303-1A.
  6. "A highly redundant gene network controls assembly of the outer spore wall in S. cerevisiae."
    Lin C.P., Kim C., Smith S.O., Neiman A.M.
    PLoS Genet. 9:E1003700-E1003700(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, SUBCELLULAR LOCATION, DISRUPTION PHENOTYPE.
  7. "A visual screen of protein localization during sporulation identifies new components of prospore membrane-associated complexes in budding yeast."
    Lam C., Santore E., Lavoie E., Needleman L., Fiacco N., Kim C., Neiman A.M.
    Eukaryot. Cell 13:383-391(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION.

Entry informationi

Entry nameiLDS1_YEAST
AccessioniPrimary (citable) accession number: P31379
Secondary accession number(s): D6VPK0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: July 1, 1993
Last modified: June 8, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome I
    Yeast (Saccharomyces cerevisiae) chromosome I: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.