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Protein

Protein YdeJ

Gene

ydeJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Does not have nicotinamide-nucleotide (NMN) amidohydrolase activity.

Enzyme and pathway databases

BioCyciEcoCyc:EG11645-MONOMER.
ECOL316407:JW1530-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YdeJ
Gene namesi
Name:ydeJ
Ordered Locus Names:b1537, JW1530
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11645. ydeJ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001567951 – 172Protein YdeJAdd BLAST172

Proteomic databases

PaxDbiP31131.
PRIDEiP31131.

Interactioni

Protein-protein interaction databases

BioGridi4260214. 14 interactors.
IntActiP31131. 6 interactors.
STRINGi511145.b1537.

Structurei

3D structure databases

ProteinModelPortaliP31131.
SMRiP31131.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CinA family.Curated

Phylogenomic databases

eggNOGiENOG4108WTK. Bacteria.
COG1546. LUCA.
HOGENOMiHOG000242527.
InParanoidiP31131.
OMAiCAEENTA.
PhylomeDBiP31131.

Family and domain databases

Gene3Di3.90.950.20. 1 hit.
InterProiIPR008136. CinA_C.
[Graphical view]
PfamiPF02464. CinA. 1 hit.
[Graphical view]
SUPFAMiSSF142433. SSF142433. 1 hit.
TIGRFAMsiTIGR00199. PncC_domain. 1 hit.

Sequencei

Sequence statusi: Complete.

P31131-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNINRDKIVQ LVDTDTIENL TSALSQRLIA DQLRLTTAES CTGGKLASAL
60 70 80 90 100
CAAEDTPKFY GAGFVTFTDQ AKMKILSVSQ QSLERYSAVS EKVAAEMATG
110 120 130 140 150
AIERADADVS IAITGYGGPE GGEDGTPAGT VWFAWHIKGQ NYTAVMHFAG
160 170
DCETVLALAV RFALAQLLQL LL
Length:172
Mass (Da):18,321
Last modified:July 1, 1993 - v1
Checksum:i700A7A95C967C868
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M96235 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC74610.1.
AP009048 Genomic DNA. Translation: BAA15227.1.
PIRiD64908.
RefSeqiNP_416055.1. NC_000913.3.
WP_001024746.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74610; AAC74610; b1537.
BAA15227; BAA15227; BAA15227.
GeneIDi946067.
KEGGiecj:JW1530.
eco:b1537.
PATRICi32118374. VBIEscCol129921_1607.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M96235 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC74610.1.
AP009048 Genomic DNA. Translation: BAA15227.1.
PIRiD64908.
RefSeqiNP_416055.1. NC_000913.3.
WP_001024746.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP31131.
SMRiP31131.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260214. 14 interactors.
IntActiP31131. 6 interactors.
STRINGi511145.b1537.

Proteomic databases

PaxDbiP31131.
PRIDEiP31131.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74610; AAC74610; b1537.
BAA15227; BAA15227; BAA15227.
GeneIDi946067.
KEGGiecj:JW1530.
eco:b1537.
PATRICi32118374. VBIEscCol129921_1607.

Organism-specific databases

EchoBASEiEB1598.
EcoGeneiEG11645. ydeJ.

Phylogenomic databases

eggNOGiENOG4108WTK. Bacteria.
COG1546. LUCA.
HOGENOMiHOG000242527.
InParanoidiP31131.
OMAiCAEENTA.
PhylomeDBiP31131.

Enzyme and pathway databases

BioCyciEcoCyc:EG11645-MONOMER.
ECOL316407:JW1530-MONOMER.

Miscellaneous databases

PROiP31131.

Family and domain databases

Gene3Di3.90.950.20. 1 hit.
InterProiIPR008136. CinA_C.
[Graphical view]
PfamiPF02464. CinA. 1 hit.
[Graphical view]
SUPFAMiSSF142433. SSF142433. 1 hit.
TIGRFAMsiTIGR00199. PncC_domain. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYDEJ_ECOLI
AccessioniPrimary (citable) accession number: P31131
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: July 1, 1993
Last modified: November 2, 2016
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.