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Protein

Uncharacterized protein YdeI

Gene

ydeI

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

  • cellular response to hydrogen peroxide Source: EcoCyc
  • single-species biofilm formation on inanimate substrate Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG11644-MONOMER.
ECOL316407:JW1529-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YdeI
Gene namesi
Name:ydeI
Ordered Locus Names:b1536, JW1529
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11644. ydeI.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 130111Uncharacterized protein YdeIPRO_0000013844Add
BLAST

Proteomic databases

PaxDbiP31130.
PRIDEiP31130.

Interactioni

Protein-protein interaction databases

BioGridi4259115. 17 interactions.
DIPiDIP-11678N.
IntActiP31130. 2 interactions.
MINTiMINT-1260141.
STRINGi511145.b1536.

Structurei

3D structure databases

ProteinModelPortaliP31130.
SMRiP31130. Positions 51-130.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108YDI. Bacteria.
COG3111. LUCA.
HOGENOMiHOG000216776.
OMAiMHDGATV.

Family and domain databases

Gene3Di2.40.50.200. 1 hit.
InterProiIPR005220. BOF.
IPR016052. Phage_933W_L0136.
[Graphical view]
PfamiPF04076. BOF. 1 hit.
[Graphical view]
SUPFAMiSSF101756. SSF101756. 1 hit.
TIGRFAMsiTIGR00156. TIGR00156. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P31130-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKFQAIVLAS FLVMPYALAD DQGGLKQDAA PPPPHAIEDG YRGTDDAKKM
60 70 80 90 100
TVDFAKTMHD GASVSLRGNL ISHKGEDRYV FRDKSGEINV VIPAAVFDGR
110 120 130
EVQPDQMINI SGSLDKKSAP AVVRVTHLQK
Length:130
Mass (Da):14,121
Last modified:July 1, 1993 - v1
Checksum:iC77C4DA6CA63C59D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M96235 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC74609.1.
AP009048 Genomic DNA. Translation: BAA15226.1.
PIRiC64908.
RefSeqiNP_416054.1. NC_000913.3.
WP_000671737.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74609; AAC74609; b1536.
BAA15226; BAA15226; BAA15226.
GeneIDi946068.
KEGGiecj:JW1529.
eco:b1536.
PATRICi32118372. VBIEscCol129921_1606.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M96235 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC74609.1.
AP009048 Genomic DNA. Translation: BAA15226.1.
PIRiC64908.
RefSeqiNP_416054.1. NC_000913.3.
WP_000671737.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP31130.
SMRiP31130. Positions 51-130.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259115. 17 interactions.
DIPiDIP-11678N.
IntActiP31130. 2 interactions.
MINTiMINT-1260141.
STRINGi511145.b1536.

Proteomic databases

PaxDbiP31130.
PRIDEiP31130.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74609; AAC74609; b1536.
BAA15226; BAA15226; BAA15226.
GeneIDi946068.
KEGGiecj:JW1529.
eco:b1536.
PATRICi32118372. VBIEscCol129921_1606.

Organism-specific databases

EchoBASEiEB1597.
EcoGeneiEG11644. ydeI.

Phylogenomic databases

eggNOGiENOG4108YDI. Bacteria.
COG3111. LUCA.
HOGENOMiHOG000216776.
OMAiMHDGATV.

Enzyme and pathway databases

BioCyciEcoCyc:EG11644-MONOMER.
ECOL316407:JW1529-MONOMER.

Miscellaneous databases

PROiP31130.

Family and domain databases

Gene3Di2.40.50.200. 1 hit.
InterProiIPR005220. BOF.
IPR016052. Phage_933W_L0136.
[Graphical view]
PfamiPF04076. BOF. 1 hit.
[Graphical view]
SUPFAMiSSF101756. SSF101756. 1 hit.
TIGRFAMsiTIGR00156. TIGR00156. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYDEI_ECOLI
AccessioniPrimary (citable) accession number: P31130
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: July 1, 1993
Last modified: September 7, 2016
This is version 119 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.