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Protein

DNA-packaging protein NU1 homolog

Gene

nohD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Miscellaneous

Encoded by the cryptic lambdoid prophage DLP12.

Enzyme and pathway databases

BioCyciEcoCyc:EG11635-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-packaging protein NU1 homolog
Gene namesi
Name:nohD
Synonyms:nohB
Ordered Locus Names:b0560, JW0549
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11635 nohD

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000969281 – 181DNA-packaging protein NU1 homologAdd BLAST181

Proteomic databases

PaxDbiP31062
PRIDEiP31062

Interactioni

Protein-protein interaction databases

BioGridi4261544, 122 interactors
IntActiP31062, 12 interactors

Structurei

3D structure databases

ProteinModelPortaliP31062
SMRiP31062
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To phage lambda DNA packaging protein NU1.Curated

Phylogenomic databases

eggNOGiENOG4105FKG Bacteria
COG4220 LUCA
HOGENOMiHOG000119387
InParanoidiP31062
KOiK22014
OMAiTRTITTW

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR009061 DNA-bd_dom_put_sf
IPR010906 Phage_lambda_Nu1_terminase-ssu
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF07471 Phage_Nu1, 1 hit
SUPFAMiSSF46955 SSF46955, 1 hit

Sequencei

Sequence statusi: Complete.

P31062-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVNKKQLAD IFGASIRTIQ NWQEQGMPVL RGGGKGNEVL YDSAAVIKWY
60 70 80 90 100
AERDAEIENE KLRREVEELL QASETDLQPG TIEYERHRLT RAQADAQELK
110 120 130 140 150
NARDSAEVVE TAFCTFVLSR IAGEIASILD GIPLSVQRRF PELENRHVDF
160 170 180
LKRDIIKAMN KAAALDELIP GLLSEYIEQS G
Length:181
Mass (Da):20,428
Last modified:November 1, 1997 - v2
Checksum:iE38D4FBFF174751C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC73661.1
AP009048 Genomic DNA Translation: BAE76336.1
D00928 Genomic DNA No translation available.
PIRiF64788
RefSeqiNP_415092.1, NC_000913.3
WP_000453566.1, NZ_CP014272.1

Genome annotation databases

EnsemblBacteriaiAAC73661; AAC73661; b0560
BAE76336; BAE76336; BAE76336
GeneIDi945172
KEGGiecj:JW0549
eco:b0560
PATRICifig|511145.12.peg.584

Similar proteinsi

Entry informationi

Entry nameiNOHD_ECOLI
AccessioniPrimary (citable) accession number: P31062
Secondary accession number(s): P75721, Q2MBM0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: November 1, 1997
Last modified: March 28, 2018
This is version 104 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
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