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Protein

Putative prophage Qin DNA-packaging protein NU1 homolog

Gene

nohA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11634-MONOMER.
ECOL316407:JW1541-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative prophage Qin DNA-packaging protein NU1 homolog
Gene namesi
Name:nohA
Ordered Locus Names:b1548, JW1541
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11634. nohA.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 189189Putative prophage Qin DNA-packaging protein NU1 homologPRO_0000096927Add
BLAST

Proteomic databases

PaxDbiP31061.

Interactioni

Protein-protein interaction databases

BioGridi4260236. 133 interactions.
DIPiDIP-10355N.
IntActiP31061. 6 interactions.
MINTiMINT-1285423.
STRINGi511145.b0560.

Structurei

3D structure databases

ProteinModelPortaliP31061.
SMRiP31061. Positions 1-68.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To phage lambda DNA packaging protein NU1.Curated

Phylogenomic databases

eggNOGiENOG4105FKG. Bacteria.
COG4220. LUCA.
HOGENOMiHOG000119387.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR009061. DNA-bd_dom_put.
IPR010906. Phage_lambda_Nu1_terminase-ssu.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF07471. Phage_Nu1. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.

Sequencei

Sequence statusi: Complete.

P31061-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVNKKQLAD IFGASIRTIQ NWQEQGMPVL RGGGKGNEVL YDSAAVIRWY
60 70 80 90 100
AERDAEIENE KLRREVEELR QASETDLQPG TIEYERHRLT RAQADAQELK
110 120 130 140 150
NARDSAEVVE TAFCTFVLSR IAGEIASILD GIPLSVQRRF PELENRHVDF
160 170 180
LKRDIIKAMN KAAALDELIP GLLSEYNRAD RQYAGGSRS
Length:189
Mass (Da):21,404
Last modified:November 1, 1997 - v2
Checksum:iFB5B1F844AB2C7C1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAA15252.1.
D00927 Genomic DNA. No translation available.
PIRiG64909.
RefSeqiWP_000453612.1. NZ_CP014272.1.

Genome annotation databases

EnsemblBacteriaiBAA15252; BAA15252; BAA15252.
KEGGiecj:JW1541.
PATRICi48662414. VBIEscCol107702_1568.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAA15252.1.
D00927 Genomic DNA. No translation available.
PIRiG64909.
RefSeqiWP_000453612.1. NZ_CP014272.1.

3D structure databases

ProteinModelPortaliP31061.
SMRiP31061. Positions 1-68.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260236. 133 interactions.
DIPiDIP-10355N.
IntActiP31061. 6 interactions.
MINTiMINT-1285423.
STRINGi511145.b0560.

Proteomic databases

PaxDbiP31061.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA15252; BAA15252; BAA15252.
KEGGiecj:JW1541.
PATRICi48662414. VBIEscCol107702_1568.

Organism-specific databases

EchoBASEiEB1590.
EcoGeneiEG11634. nohA.

Phylogenomic databases

eggNOGiENOG4105FKG. Bacteria.
COG4220. LUCA.
HOGENOMiHOG000119387.

Enzyme and pathway databases

BioCyciEcoCyc:EG11634-MONOMER.
ECOL316407:JW1541-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR009061. DNA-bd_dom_put.
IPR010906. Phage_lambda_Nu1_terminase-ssu.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF07471. Phage_Nu1. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-147.
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiNOHA_ECOLI
AccessioniPrimary (citable) accession number: P31061
Secondary accession number(s): P77152
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: November 1, 1997
Last modified: May 11, 2016
This is version 105 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.