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Reviewed, UniProtKB/Swiss-Prot P30872 (SSR1_HUMAN)

Last modified June 16, 2009. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Somatostatin receptor type 1
Alternative name(s):
    SS1R
    SRIF-2
Gene names
Name: SSTR1
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length391 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Function

Receptor for somatostatin with higher affinity for somatostatin-14 than -28. This receptor is coupled via pertussis toxin sensitive G proteins to inhibition of adenylyl cyclase. In addition it stimulates phosphotyrosine phosphatase and Na+/H+ exchanger via pertussis toxin insensitive G proteins.

Subunit structure

Interacts with SKB1. Ref.4

Subcellular location

Cell membrane; Multi-pass membrane protein.

Tissue specificity

Fetal kidney, fetal liver, and adult pancreas, brain, lung, jejunum and stomach.

Sequence similarities

Belongs to the G-protein coupled receptor 1 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 391391Somatostatin receptor type 1
PRO_0000070116

Regions

Topological domain1 – 5656Extracellular Potential
Transmembrane57 – 84281 Potential
Topological domain85 – 9410Cytoplasmic Potential
Transmembrane95 – 120262 Potential
Topological domain121 – 13111Extracellular Potential
Transmembrane132 – 153223 Potential
Topological domain154 – 17522Cytoplasmic Potential
Transmembrane176 – 196214 Potential
Topological domain197 – 21923Extracellular Potential
Transmembrane220 – 244255 Potential
Topological domain245 – 27026Cytoplasmic Potential
Transmembrane271 – 296266 Potential
Topological domain297 – 3037Extracellular Potential
Transmembrane304 – 327247 Potential
Topological domain328 – 39164Cytoplasmic Potential

Amino acid modifications

Lipidation3391S-palmitoyl cysteine Potential
Glycosylation41N-linked (GlcNAc...) Potential
Glycosylation441N-linked (GlcNAc...) Potential
Glycosylation481N-linked (GlcNAc...) Potential
Disulfide bond130 ↔ 208 By similarity

Sequences

Sequence LengthMass (Da)Tools
P30872-1 [UniParc].

Last modified July 1, 1993. Version 1.
Checksum: 85C99AFFF339A43D

FASTA39142,686
        10         20         30         40         50         60 
MFPNGTASSP SSSPSPSPGS CGEGGGSRGP GAGAADGMEE PGRNASQNGT LSEGQGSAIL 

        70         80         90        100        110        120 
ISFIYSVVCL VGLCGNSMVI YVILRYAKMK TATNIYILNL AIADELLMLS VPFLVTSTLL 

       130        140        150        160        170        180 
RHWPFGALLC RLVLSVDAVN MFTSIYCLTV LSVDRYVAVV HPIKAARYRR PTVAKVVNLG 

       190        200        210        220        230        240 
VWVLSLLVIL PIVVFSRTAA NSDGTVACNM LMPEPAQRWL VGFVLYTFLM GFLLPVGAIC 

       250        260        270        280        290        300 
LCYVLIIAKM RMVALKAGWQ QRKRSERKIT LMVMMVVMVF VICWMPFYVV QLVNVFAEQD 

       310        320        330        340        350        360 
DATVSQLSVI LGYANSCANP ILYGFLSDNF KRSFQRILCL SWMDNAAEEP VDYYATALKS 

       370        380        390 
RAYSVEDFQP ENLESGGVFR NGTCTSRITT L 

« Hide

References

« Hide 'large scale' references
[1]"Cloning and functional characterization of a family of human and mouse somatostatin receptors expressed in brain, gastrointestinal tract, and kidney."
Yamada Y., Post S.R., Wang K., Tager H.S., Bell G.I., Seino S.
Proc. Natl. Acad. Sci. U.S.A. 89:251-255(1992) [PubMed: 1346068] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"cDNA clones of human proteins involved in signal transduction sequenced by the Guthrie cDNA resource center (www.cdna.org)."
Kopatz S.A., Aronstam R.S., Sharma S.V.
Submitted (JUN-2003) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain.
[4]"Interaction of the somatostatin receptor subtype 1 with the human homolog of the Shk1 kinase-binding protein from yeast."
Schwaerzler A., Kreienkamp H.-J., Richter D.
J. Biol. Chem. 275:9557-9562(2000) [PubMed: 10734105] [Abstract]
Cited for: INTERACTION WITH SKB1.
+Additional computationally mapped references.

Cross-references

Sequence databases

M81829 Genomic DNA. Translation: AAA58247.1.
AY322536 Genomic DNA. Translation: AAP84349.1.
BC035618 mRNA. Translation: AAH35618.1.
IPIIPI00027804.
PIRA41795.
RefSeqNP_001040.1.
UniGeneHs.248160

3D structure databases

ModBaseSearch...

Protein family/group databases

GPCRDBSearch...

Proteomic databases

PRIDEP30872.

Genome annotation databases

EnsemblENSG00000139874. Homo sapiens. [Contig view]
GeneID6751.
KEGGhsa:6751.

Organism-specific databases

GeneCardsGC14P037746.
H-InvDBHIX0026752.
HGNCHGNC:11330. SSTR1.
HPACAB009773.
MIM182451. gene.
PharmGKBPA36154.
GenAtlasSearch...

Phylogenomic databases

HOGENOMP30872.
HOVERGENP30872.
OMAP30872. CTSRITT.

Enzyme and pathway databases

ReactomeREACT_14797. Signaling by GPCR.

Gene expression databases

ArrayExpressP30872.
BgeeP30872.
CleanExHS_SSTR1.
GermOnlineENSG00000139874. Homo sapiens.

Family and domain databases

InterProIPR000276. 7TM_GPCR_Rhodpsn.
IPR017452. GPCR_Rhodpsn_supfam.
IPR000586. Somatstn_rcpt.
IPR001116. Somatstn_rcpt_1.
[Graphical view]
PANTHERPTHR19264:SF272. Somatstn_rcpt_1. 1 hit.
PfamPF00001. 7tm_1. 1 hit.
[Graphical view]
PRINTSPR00237. GPCRRHODOPSN.
PR00246. SOMATOSTATNR.
PR00587. SOMATOSTTN1R.
PROSITEPS00237. G_PROTEIN_RECEP_F1_1. 1 hit.
PS50262. G_PROTEIN_RECEP_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

DrugBankDB00104. Octreotide.
NextBio26336.
SOURCESearch...

Entry information

Entry nameSSR1_HUMAN
AccessionPrimary (citable) accession number: P30872
Entry history
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: July 1, 1993
Last modified: June 16, 2009
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

Relevant documents

7-transmembrane G-linked receptors

List of 7-transmembrane G-linked receptor entries

Human chromosome 14

Human chromosome 14: entries, gene names and cross-references to MIM

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents