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P30773

- T2X1_XANCC

UniProt

P30773 - T2X1_XANCC

Protein

Type-2 restriction enzyme XcyI

Gene

xcyIR

Organism
Xanthomonas campestris pv. cyanopsidis
Status
Reviewed - Annotation score: 3 out of 5- Protein predictedi
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    • History
      Entry version 55 (16 Apr 2014)
      Sequence version 1 (01 Jul 1993)
      Previous versions | rss
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    Functioni

    Recognizes the double-stranded sequence CCCGGG and cleaves after C-1.

    Catalytic activityi

    Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates.

    Cofactori

    Magnesium.

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. magnesium ion binding Source: InterPro
    3. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA restriction-modification system Source: UniProtKB-KW

    Keywords - Molecular functioni

    Endonuclease, Hydrolase, Nuclease

    Keywords - Biological processi

    Restriction system

    Keywords - Ligandi

    Magnesium

    Protein family/group databases

    REBASEi2130. XcyI.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Type-2 restriction enzyme XcyI (EC:3.1.21.4)
    Short name:
    R.XcyI
    Alternative name(s):
    Endonuclease XcyI
    Type II restriction enzyme XcyI
    Gene namesi
    Name:xcyIR
    OrganismiXanthomonas campestris pv. cyanopsidis
    Taxonomic identifieri29444 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 333333Type-2 restriction enzyme XcyIPRO_0000077371Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.

    Family & Domainsi

    Family and domain databases

    InterProiIPR019071. Restrct_endonuc_II_XcyI.
    [Graphical view]
    PfamiPF09571. RE_XcyI. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P30773-1 [UniParc]FASTAAdd to Basket

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    MTTPNKINFP PPKLQIDFAF ALKRFRAVYL QSALLETVRD MDIAELDRQL    50
    SKYVPPADLA TLAQYGLRAE LLFAVPAVLE ANPHLLGYYR LLMGYSQKEF 100
    YGRDKGFGVG CFKSMEEKGK AGKAAVADLH DLCVAFCATA SALLAGVGPL 150
    RVSRELLDDL TLLTVGPQLR GGANNQRGAD GIVLVFEIIR EIVAHAAAEV 200
    RESAIEVNSA TGRPVLIEFA PDPDIIIREE MENQHYRNVV AIEVKSGTDV 250
    SNIHNRIGEA EKSHQKARQL GFTECWTVVN VGRLDMVKAR SESPSTDRFY 300
    SLTALSLRAG DEYADFRRRV LSLTAIPARP ANP 333
    Length:333
    Mass (Da):36,686
    Last modified:July 1, 1993 - v1
    Checksum:iDA0DCBB8CCDBD55A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M98768 Genomic DNA. Translation: AAA27609.1.
    PIRiS35550.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    M98768 Genomic DNA. Translation: AAA27609.1 .
    PIRi S35550.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    REBASEi 2130. XcyI.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR019071. Restrct_endonuc_II_XcyI.
    [Graphical view ]
    Pfami PF09571. RE_XcyI. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Structure and evolution of the XcyI restriction-modification system."
      Withers B., Ambroso L.A., Dunbar J.C.
      Nucleic Acids Res. 20:6267-6273(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: 13D5.

    Entry informationi

    Entry nameiT2X1_XANCC
    AccessioniPrimary (citable) accession number: P30773
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 1, 1993
    Last sequence update: July 1, 1993
    Last modified: April 16, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Documents

    1. Restriction enzymes and methylases
      Classification of restriction enzymes and methylases and list of entries

    External Data

    Dasty 3