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Reviewed, UniProtKB/Swiss-Prot P30566 (PUR8_HUMAN)

Last modified November 24, 2009. Version 112. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (7) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Web resources · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Adenylosuccinate lyase
      Short name=ASL
    EC=4.3.2.2
Alternative name(s):
    Adenylosuccinase
      Short name=ASase
Gene names
Name: ADSL
Synonyms: AMPS
OrganismHomo sapiens (Human) [Complete proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length484 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level.

General annotation (Comments)

Catalytic activity

N(6)-(1,2-dicarboxyethyl)AMP = fumarate + AMP.

(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate = fumarate + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide.

Pathway

Purine metabolism; AMP biosynthesis via de novo pathway; AMP from IMP: step 2/2.

Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate: step 2/2.

Tissue specificity

Ubiquitously expressed. Both isoforms are produced by all tissues.

Involvement in disease

Defects in ADSL are the cause of adenylosuccinase deficiency (ADSL deficiency) [MIM:103050]. ADSL deficiency is an autosomal recessive disorder characterized by the accumulation in the body fluids of succinylaminoimidazole-carboxamide riboside (SAICA-riboside) and succinyladenosine (S-Ado). Most children display marked psychomotor delay, often accompanied by epilepsy or autistic features, or both, although some patients may be less profoundly retarded. Occasionally, growth retardation and muscular wasting are also present.

Sequence similarities

Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.

Alternative products

This entry describes 2 isoforms produced by alternative splicing. [Align] [Select]
Isoform 1 (identifier: P30566-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform 2 (identifier: P30566-2)

Also known as: Delta-ADSL;

The sequence of this isoform differs from the canonical sequence as follows:
     398-456: Missing.
Note: No enzymatic activity. 10-fold less abundant than isoform 1.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed Ref.7
Chain2 – 484483Adenylosuccinate lyase
PRO_0000137892

Sites

Active site861Proton donor By similarity
Active site1591Proton acceptor By similarity

Amino acid modifications

Modified residue21N-acetylalanine Ref.7
Modified residue91Phosphoserine Ref.9
Modified residue1471N6-acetyllysine Ref.12
Modified residue2951N6-acetyllysine Ref.12

Natural variations

Alternative sequence398 – 45659Missing in isoform 2.
VSP_000318
Natural variant21A → V in ADSL deficiency; severe. Ref.16
VAR_016930
Natural variant31A → V in ADSL deficiency; severe. Ref.2
VAR_017078
Natural variant261M → L in ADSL deficiency; severe. Ref.16
VAR_016931
Natural variant311S → N: dbSNP rs5757921.
VAR_037883
Natural variant721I → V in ADSL deficiency; severe. Ref.15
VAR_007972
Natural variant1001P → A in ADSL deficiency; moderate. Ref.14
VAR_017079
Natural variant1141Y → H in ADSL deficiency; severe. Total loss of activity. Ref.2
VAR_017080
Natural variant1411R → W in ADSL deficiency; severe. Ref.16 Ref.15
VAR_007973
Natural variant1471K → M: dbSNP rs11089991.
VAR_037884
Natural variant1901R → Q in ADSL deficiency; moderate. dbSNP rs28941471.
VAR_007974
Natural variant1941R → C in ADSL deficiency; severe. Ref.2
VAR_017081
Natural variant2461K → E in ADSL deficiency; moderate. Ref.15
VAR_007975
Natural variant2681D → N in ADSL deficiency; severe. Total loss of activity. Ref.2
VAR_017082
Natural variant3031R → C in ADSL deficiency; mild. Ref.16 Ref.15
VAR_007976
Natural variant3111L → V in ADSL deficiency; severe. Ref.17
VAR_017083
Natural variant3181P → L in ADSL deficiency; severe.
VAR_017084
Natural variant3641V → M in ADSL deficiency; severe. Ref.17
VAR_017085
Natural variant3741R → W in ADSL deficiency; severe.
VAR_017086
Natural variant3951S → R in ADSL deficiency; severe. Ref.16 Ref.15
VAR_007977
Natural variant3961R → C in ADSL deficiency; severe.
VAR_017087
Natural variant3961R → H in ADSL deficiency; severe. Ref.17
VAR_017088
Natural variant4221D → Y in ADSL deficiency; moderate. Ref.14
VAR_017089
Natural variant4231L → V in ADSL deficiency; moderate.
VAR_017090
Natural variant4261R → H in ADSL deficiency; severe. Most frequent mutation. Ref.16 Ref.2 Ref.15 Ref.13 Ref.18
VAR_007978
Natural variant4301D → N in ADSL deficiency; mild. Ref.2
VAR_017091
Natural variant4381S → P in ADSL deficiency; severe. Ref.7
VAR_000680
Natural variant4471S → P in ADSL deficiency; severe.
VAR_017092
Natural variant4501T → S in ADSL deficiency; moderate. Ref.16
VAR_016932
Natural variant4521R → P in ADSL deficiency; severe. Ref.17
VAR_017093

Secondary structure

............................................................... 484
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified May 30, 2000. Version 2.
Checksum: 7AA3A0A2C681FD94

FASTA48454,889
        10         20         30         40         50         60 
MAAGGDHGSP DSYRSPLASR YASPEMCFVF SDRYKFRTWR QLWLWLAEAE QTLGLPITDE 

        70         80         90        100        110        120 
QIQEMKSNLE NIDFKMAAEE EKRLRHDVMA HVHTFGHCCP KAAGIIHLGA TSCYVGDNTD 

       130        140        150        160        170        180 
LIILRNALDL LLPKLARVIS RLADFAKERA SLPTLGFTHF QPAQLTTVGK RCCLWIQDLC 

       190        200        210        220        230        240 
MDLQNLKRVR DDLRFRGVKG TTGTQASFLQ LFEGDDHKVE QLDKMVTEKA GFKRAFIITG 

       250        260        270        280        290        300 
QTYTRKVDIE VLSVLASLGA SVHKICTDIR LLANLKEMEE PFEKQQIGSS AMPYKRNPMR 

       310        320        330        340        350        360 
SERCCSLARH LMTLVMDPLQ TASVQWFERT LDDSANRRIC LAEAFLTADT ILNTLQNISE 

       370        380        390        400        410        420 
GLVVYPKVIE RRIRQELPFM ATENIIMAMV KAGGSRQDCH EKIRVLSQQA ASVVKQEGGD 

       430        440        450        460        470        480 
NDLIERIQVD AYFSPIHSQL DHLLDPSSFT GRASQQVQRF LEEEVYPLLK PYESVMKVKA 


ELCL 

« Hide

Isoform 2 (Delta-ADSL).

Checksum: 66356963E46FDA3D
Show »

FASTA42548,328

References

« Hide 'large scale' references
[1]"Mapping of the human adenylosuccinate lyase (ADSL) gene to chromosome 22q13.1-->q13.2."
Fon E.A., Demczuk S., Delattre O., Thomas G., Rouleau G.A.
Cytogenet. Cell Genet. 64:201-203(1993) [PubMed: 8404037] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
Tissue: Brain.
[2]"Human adenylosuccinate lyase (ADSL), cloning and characterization of full-length cDNA and its isoform, gene structure and molecular basis for ADSL deficiency in six patients."
Kmoch S., Hartmannova H., Stiburkova B., Krijt J., Zikanova M., Sebesta I.
Hum. Mol. Genet. 9:1501-1513(2000) [PubMed: 10888601] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), VARIANTS ADSL DEFICIENCY VAL-3; HIS-114; GLN-190; CYS-194; ASN-268; HIS-426 AND ASN-430.
Tissue: Skeletal muscle.
[3]"A genome annotation-driven approach to cloning the human ORFeome."
Collins J.E., Wright C.L., Edwards C.A., Davis M.P., Grinham J.A., Cole C.G., Goward M.E., Aguado B., Mallya M., Mokrab Y., Huckle E.J., Beare D.M., Dunham I.
Genome Biol. 5:R84.1-R84.11(2004) [PubMed: 15461802] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
[4]"The DNA sequence of human chromosome 22."
Dunham I., Hunt A.R., Collins J.E., Bruskiewich R., Beare D.M., Clamp M., Smink L.J., Ainscough R., Almeida J.P., Babbage A.K., Bagguley C., Bailey J., Barlow K.F., Bates K.N., Beasley O.P., Bird C.P., Blakey S.E., Bridgeman A.M. expand/collapse author list , Buck D., Burgess J., Burrill W.D., Burton J., Carder C., Carter N.P., Chen Y., Clark G., Clegg S.M., Cobley V.E., Cole C.G., Collier R.E., Connor R., Conroy D., Corby N.R., Coville G.J., Cox A.V., Davis J., Dawson E., Dhami P.D., Dockree C., Dodsworth S.J., Durbin R.M., Ellington A.G., Evans K.L., Fey J.M., Fleming K., French L., Garner A.A., Gilbert J.G.R., Goward M.E., Grafham D.V., Griffiths M.N.D., Hall C., Hall R.E., Hall-Tamlyn G., Heathcott R.W., Ho S., Holmes S., Hunt S.E., Jones M.C., Kershaw J., Kimberley A.M., King A., Laird G.K., Langford C.F., Leversha M.A., Lloyd C., Lloyd D.M., Martyn I.D., Mashreghi-Mohammadi M., Matthews L.H., Mccann O.T., Mcclay J., Mclaren S., McMurray A.A., Milne S.A., Mortimore B.J., Odell C.N., Pavitt R., Pearce A.V., Pearson D., Phillimore B.J.C.T., Phillips S.H., Plumb R.W., Ramsay H., Ramsey Y., Rogers L., Ross M.T., Scott C.E., Sehra H.K., Skuce C.D., Smalley S., Smith M.L., Soderlund C., Spragon L., Steward C.A., Sulston J.E., Swann R.M., Vaudin M., Wall M., Wallis J.M., Whiteley M.N., Willey D.L., Williams L., Williams S.A., Williamson H., Wilmer T.E., Wilming L., Wright C.L., Hubbard T., Bentley D.R., Beck S., Rogers J., Shimizu N., Minoshima S., Kawasaki K., Sasaki T., Asakawa S., Kudoh J., Shintani A., Shibuya K., Yoshizaki Y., Aoki N., Mitsuyama S., Roe B.A., Chen F., Chu L., Crabtree J., Deschamps S., Do A., Do T., Dorman A., Fang F., Fu Y., Hu P., Hua A., Kenton S., Lai H., Lao H.I., Lewis J., Lewis S., Lin S.-P., Loh P., Malaj E., Nguyen T., Pan H., Phan S., Qi S., Qian Y., Ray L., Ren Q., Shaull S., Sloan D., Song L., Wang Q., Wang Y., Wang Z., White J., Willingham D., Wu H., Yao Z., Zhan M., Zhang G., Chissoe S., Murray J., Miller N., Minx P., Fulton R., Johnson D., Bemis G., Bentley D., Bradshaw H., Bourne S., Cordes M., Du Z., Fulton L., Goela D., Graves T., Hawkins J., Hinds K., Kemp K., Latreille P., Layman D., Ozersky P., Rohlfing T., Scheet P., Walker C., Wamsley A., Wohldmann P., Pepin K., Nelson J., Korf I., Bedell J.A., Hillier L.W., Mardis E., Waterston R., Wilson R., Emanuel B.S., Shaikh T., Kurahashi H., Saitta S., Budarf M.L., McDermid H.E., Johnson A., Wong A.C.C., Morrow B.E., Edelmann L., Kim U.J., Shizuya H., Simon M.I., Dumanski J.P., Peyrard M., Kedra D., Seroussi E., Fransson I., Tapia I., Bruder C.E., O'Brien K.P., Wilkinson P., Bodenteich A., Hartman K., Hu X., Khan A.S., Lane L., Tilahun Y., Wright H.
Nature 402:489-495(1999) [PubMed: 10591208] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[5]Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. expand/collapse author list , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C.
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[6]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
Tissue: Eye.
[7]"A mutation in adenylosuccinate lyase associated with mental retardation and autistic features."
Stone R.L., Aimi J., Barshop B.A., Jaeken J., van den Berghe G., Zalkin H., Dixon J.E.
Nat. Genet. 1:59-63(1992) [PubMed: 1302001] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 2-484 (ISOFORM 1), VARIANT ADSL DEFICIENCY PRO-438.
[8]Bienvenut W.V., Ramsay A., Leung H.Y.
Submitted (JUN-2009) to UniProtKB
Cited for: PROTEIN SEQUENCE OF 2-20 AND 235-245, CLEAVAGE OF INITIATOR METHIONINE, ACETYLATION AT ALA-2, MASS SPECTROMETRY.
Tissue: Embryonic kidney.
[9]"Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle."
Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R., Greff Z., Keri G., Stemmann O., Mann M.
Mol. Cell 31:438-448(2008) [PubMed: 18691976] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-9, MASS SPECTROMETRY.
[10]Colinge J., Superti-Furga G., Bennett K.L.
Submitted (OCT-2008) to UniProtKB
Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.
[11]"Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach."
Gauci S., Helbig A.O., Slijper M., Krijgsveld J., Heck A.J., Mohammed S.
Anal. Chem. 81:4493-4501(2009) [PubMed: 19413330] [Abstract]
Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, PHOSPHORYLATION [LARGE SCALE ANALYSIS] ATSER-9, MASS SPECTROMETRY.
[12]"Lysine acetylation targets protein complexes and co-regulates major cellular functions."
Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T., Olsen J.V., Mann M.
Science 325:834-840(2009) [PubMed: 19608861] [Abstract]
Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-147 AND LYS-295, MASS SPECTROMETRY.
[13]"Adenylosuccinase deficiency presenting with epilepsy in early infancy."
Maaswinkel-Mooij P.D., Laan L.A.E.M., Onkenhout W., Brouwer O.F., Jaeken J., Poorthuis B.J.H.M.
J. Inherit. Metab. Dis. 20:606-607(1997) [PubMed: 9266401] [Abstract]
Cited for: VARIANT ADSL DEFICIENCY HIS-426.
[14]"Identification of new mutations in the adenylosuccinate lyase gene associated with impaired enzyme activity in lymphocytes and red blood cells."
Verginelli D., Luckow B., Crifo C., Salerno C., Gross M.
Biochim. Biophys. Acta 1406:81-84(1998) [PubMed: 9545543] [Abstract]
Cited for: VARIANTS ADSL DEFICIENCY ALA-100 AND TYR-422.
[15]"Mutation analysis in adenylosuccinate lyase deficiency: eight novel mutations in the re-evaluated full ADSL coding sequence."
Marie S., Cuppens H., Heuterspreute M., Jaspers M., Tola E.Z., Gu X.X., Legius E., Vincent M.-F., Jaeken J., Cassiman J.-J., van den Berghe G.
Hum. Mutat. 13:197-202(1999) [PubMed: 10090474] [Abstract]
Cited for: VARIANTS ADSL DEFICIENCY VAL-72; TRP-141; GLN-190; GLU-246; CYS-303; ARG-395 AND HIS-426.
[16]"Clinical, biochemical and molecular genetic correlations in adenylosuccinate lyase deficiency."
Race V., Marie S., Vincent M.-F., Van den Berghe G.
Hum. Mol. Genet. 9:2159-2165(2000) [PubMed: 10958654] [Abstract]
Cited for: CHARACTERIZATION OF VARIANTS ADSL DEFICIENCY VAL-2; LEU-26; TRP-141; CYS-303; ARG-395; HIS-426 AND SER-450.
[17]"Screening for adenylosuccinate lyase deficiency: clinical, biochemical and molecular findings in four patients."
Castro M., Perez-Cerda C., Merinero B., Garcia M.J., Bernar J., Gil Nagel A., Torres J., Bermudez M., Garavito P., Marie S., Vincent F., Van den Berghe G., Ugarte M.
Neuropediatrics 33:186-189(2002) [PubMed: 12368987] [Abstract]
Cited for: VARIANTS ADSL DEFICIENCY VAL-311; MET-364; HIS-396 AND PRO-452.
[18]"Intrafamilial variability in the phenotypic expression of adenylosuccinate lyase deficiency: a report on three patients."
Edery P., Chabrier S., Ceballos-Picot I., Marie S., Vincent M.-F., Tardieu M.
Am. J. Med. Genet. A 120:185-190(2003) [PubMed: 12833398] [Abstract]
Cited for: VARIANT ADSL DEFICIENCY HIS-426.
+Additional computationally mapped references.

Web resources

ADSLdb

Adenylosuccinate lyase mutations database

GeneReviews

Cross-references

Sequence databases

X65867 mRNA. Translation: CAA46696.1.
X65867 mRNA. Translation: CAA46697.1. Different initiation.
AF067853 mRNA. Translation: AAC21560.1.
AF067854 mRNA. Translation: AAC21561.1.
CR456368 mRNA. Translation: CAG30254.1.
AL022238 Genomic DNA. Translation: CAI18983.1.
AL022238 Genomic DNA. Translation: CAQ08930.1.
CH471095 Genomic DNA. Translation: EAW60375.1.
BC000253 mRNA. Translation: AAH00253.1.
S60710 mRNA. Translation: AAC60603.1. Different initiation.
IPIIPI00220887.
IPI00942092.
RefSeqNP_000017.1.
NP_001116850.1.
UniGeneHs.75527

3D structure databases

EntryMethodResolution (Å)ChainPositionsPDBsum
2J91X-ray1.80A/B/C/D1-481[»]
2VD6X-ray2.00A/B/C/D1-481[»]
ModBaseSearch...

Protein-protein interaction databases

STRINGP30566.

PTM databases

PhosphoSiteP30566.

Proteomic databases

PeptideAtlasP30566.
PRIDEP30566.

Genome annotation databases

EnsemblENST00000216194; ENSP00000216194; ENSG00000239900; Homo sapiens. [Genome view]
GeneID158.
KEGGhsa:158.
UCSCuc003ayp.2. human.
uc003ays.2. human.

Organism-specific databases

CTD158.
GeneCardsGC22P039067.
H-InvDBHIX0016502.
HGNCHGNC:291. ADSL.
HPACAB019285.
HPA000525.
MIM103050. phenotype.
608222. gene.
Orphanet46. Adenylosuccinate lyase deficiency.
PharmGKBPA24600.
GenAtlasSearch...

Phylogenomic databases

HOGENOMP30566.
HOVERGENP30566.

Enzyme and pathway databases

BRENDA4.3.2.2. 247.
ReactomeREACT_1698. Metablism of nucleotides.

Gene expression databases

ArrayExpressP30566.
BgeeP30566.
CleanExHS_ADSL.
GenevestigatorP30566.
GermOnlineENSG00000100357. Homo sapiens.

Family and domain databases

InterProIPR019468. Adenylosuccinate_lyase_C.
IPR003031. D_crystallin.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
IPR008948. L-Aspartase-like.
IPR004769. Pur_lyase.
[Graphical view]
PfamPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
TIGRFAMsTIGR00928. purB. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio629.
SOURCESearch...

Entry information

Entry namePUR8_HUMAN
AccessionPrimary (citable) accession number: P30566
Secondary accession number(s): B0QY76, O75495, Q5TI34
Entry history
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: May 30, 2000
Last modified: November 24, 2009
This is version 112 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 22

Human chromosome 22: entries, gene names and cross-references to MIM

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

PATHWAY comments

Index of metabolic and biosynthesis pathways

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Web resources · Cross-references · Entry information · Relevant documents