P30301 (MIP_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 114.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Lens fiber major intrinsic protein Alternative name(s): Aquaporin-0 MIP26 Short name=MP26 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 263 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Water channel. May be responsible for regulating the osmolarity of the lens. Interactions between homotetramers from adjoining membranes may stabilize cell junctions in the eye lens core By similarity. |
| Subunit structure | Homotetramer. Homooctamer formed by head-to-head interaction between homotetramers from adjoining membranes By similarity. |
| Subcellular location | Cell membrane; Multi-pass membrane protein. Cell junction › gap junction. |
| Tissue specificity | Major component of lens fiber gap junctions. |
| Domain | Aquaporins contain two tandem repeats each containing two membrane-spanning helices and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA). Each tandem repeat contains a loop and a short helix that enter and leave the lipid bilayer on the same side By similarity. |
| Post-translational modification | Subject to partial proteolytic cleavage in the eye lens core. Partial proteolysis promotes interactions between tetramers from adjoining membranes By similarity. |
| Involvement in disease | Defects in MIP are a cause of cataract autosomal dominant (ADC) [MIM:604219]. Cataract is an opacification of the crystalline lens of the eye that frequently results in visual impairment or blindness. Opacities vary in morphology, are often confined to a portion of the lens, and may be static or progressive. In general, the more posteriorly located and dense an opacity, the greater the impact on visual function. Cataract is the most common treatable cause of visual disability in childhood. Ref.5 Ref.6 |
| Sequence similarities | Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification] |
Ontologies
| Keywords | |
|---|---|
| Biological process | Sensory transduction Transport Vision |
| Cellular component | Cell junction Cell membrane Gap junction Membrane |
| Disease | Cataract Disease mutation |
| Domain | Repeat Transmembrane Transmembrane helix |
| Molecular function | Eye lens protein |
| PTM | Phosphoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | response to stimulus Inferred from electronic annotation. Source: UniProtKB-KW visual perceptionInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | gap junction Inferred from electronic annotation. Source: UniProtKB-SubCell integral to plasma membraneTraceable author statement. Source: ProtInc |
| Molecular function | structural constituent of eye lens Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 263 | 263 | Lens fiber major intrinsic protein | PRO_0000063912 | |||||
Regions | |||||||||
| Topological domain | 1 – 8 | 8 | Cytoplasmic By similarity | ||||||
| Transmembrane | 9 – 32 | 24 | Helical; By similarity | ||||||
| Topological domain | 33 – 38 | 6 | Extracellular By similarity | ||||||
| Transmembrane | 39 – 61 | 23 | Helical; By similarity | ||||||
| Intramembrane | 62 – 67 | 6 | By similarity | ||||||
| Intramembrane | 68 – 78 | 11 | Helical; By similarity | ||||||
| Topological domain | 79 – 84 | 6 | Cytoplasmic By similarity | ||||||
| Transmembrane | 85 – 107 | 23 | Helical; By similarity | ||||||
| Topological domain | 108 – 126 | 19 | Extracellular By similarity | ||||||
| Transmembrane | 127 – 147 | 21 | Helical; By similarity | ||||||
| Topological domain | 148 – 159 | 12 | Cytoplasmic By similarity | ||||||
| Transmembrane | 160 – 176 | 17 | Helical; By similarity | ||||||
| Intramembrane | 177 – 183 | 7 | By similarity | ||||||
| Intramembrane | 184 – 194 | 11 | Helical; By similarity | ||||||
| Topological domain | 195 – 200 | 6 | Extracellular By similarity | ||||||
| Transmembrane | 201 – 219 | 19 | Helical; By similarity | ||||||
| Topological domain | 220 – 263 | 44 | Cytoplasmic By similarity | ||||||
| Motif | 68 – 70 | 3 | NPA 1 | ||||||
| Motif | 184 – 186 | 3 | NPA 2 | ||||||
Amino acid modifications | |||||||||
| Modified residue | 235 | 1 | Phosphoserine Ref.4 | ||||||
| Modified residue | 245 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 246 | 1 | Deamidated asparagine; by deterioration Ref.4 | ||||||
| Modified residue | 259 | 1 | Deamidated asparagine; by deterioration Ref.4 | ||||||
Natural variations | |||||||||
| Natural variant | 134 | 1 | E → G in ADC; non-progressive lamellar cataract; loss of activity. Ref.5 Ref.6 | VAR_011497 | |||||
| Natural variant | 138 | 1 | T → R in ADC; progressive polymorphic and lamellar cataract; loss of activity. Ref.5 Ref.6 | VAR_011498 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Genomic cloning, complete nucleotide sequence, and structure of the human gene encoding the major intrinsic protein (MIP) of the lens." Pisano M.M., Chepelinsky A.B. Genomics 11:981-990(1991) [PubMed: 1840563] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "The finished DNA sequence of human chromosome 12." Scherer S.E., Muzny D.M., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J., Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R. Gibbs R.A.Nature 440:346-351(2006) [PubMed: 16541075] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Testis. |
| [4] | "Characterization of human lens major intrinsic protein structure." Schey K.L., Little M., Fowler J.G., Crouch R.K. Invest. Ophthalmol. Vis. Sci. 41:175-182(2000) [PubMed: 10634618] [Abstract] Cited for: PHOSPHORYLATION AT SER-235, DEAMIDATION AT ASN-246 AND ASN-259, MASS SPECTROMETRY. |
| [5] | "Missense mutations in MIP underlie autosomal dominant 'polymorphic' and lamellar cataracts linked to 12q." Berry V., Francis P., Kaushal S., Moore A., Bhattacharya S. Nat. Genet. 25:15-17(2000) [PubMed: 10802646] [Abstract] Cited for: VARIANTS ADC GLY-134 AND ARG-138. |
| [6] | "Functional impairment of lens aquaporin in two families with dominantly inherited cataracts." Francis P., Chung J.-J., Yasui M., Berry V., Moore A., Wyatt M.K., Wistow G., Bhattacharya S.S., Agre P. Hum. Mol. Genet. 9:2329-2334(2000) [PubMed: 11001937] [Abstract] Cited for: VARIANTS ADC GLY-134 AND ARG-138. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | U36308 Genomic DNA. Translation: AAC02794.2. AC024884 Genomic DNA. No translation available. BC074913 mRNA. Translation: AAH74913.1. BC117474 mRNA. Translation: AAI17475.1. |
| IPI | IPI00026069. |
| PIR | A55279. |
| RefSeq | NP_036196.1. NM_012064.3. |
| UniGene | Hs.574026. |
3D structure databases | |
| ProteinModelPortal | P30301. |
| SMR | P30301. Positions 2-263. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | P30301. |
PTM databases | |
| PhosphoSite | P30301. |
Polymorphism databases | |
| DMDM | 266537. |
2D gel databases | |
| OGP | P30301. |
Proteomic databases | |
| PRIDE | P30301. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000257979; ENSP00000257979; ENSG00000135517. |
| GeneID | 4284. |
| KEGG | hsa:4284. |
| UCSC | uc001slh.1. human. |
Organism-specific databases | |
| CTD | 4284. |
| GeneCards | GC12M056843. |
| H-InvDB | HIX0036831. |
| HGNC | HGNC:7103. MIP. |
| MIM | 154050. gene+phenotype. 604219. phenotype. |
| neXtProt | NX_P30301. |
| Orphanet | 98995. Zonular cataract. |
| PharmGKB | PA30821. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG08264. |
| GeneTree | ENSGT00550000074347. |
| HOGENOM | HBG705794. |
| HOVERGEN | HBG000312. |
| InParanoid | P30301. |
| OMA | DSNGQPE. |
| OrthoDB | EOG4CJVHW. |
| PhylomeDB | P30301. |
Enzyme and pathway databases | |
| Reactome | REACT_15518. Transmembrane transport of small molecules. |
Gene expression databases | |
| ArrayExpress | P30301. |
| Bgee | P30301. |
| CleanEx | HS_MIP. |
| Genevestigator | P30301. |
| GermOnline | ENSG00000135517. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR012269. Aquaporin. IPR023271. Aquaporin-like. IPR000425. MIP. IPR022357. MIP_CS. [Graphical view] |
| Gene3D | G3DSA:1.20.1080.10. MIP. 1 hit. |
| KO | K09863. |
| PANTHER | PTHR19139. MIP. 1 hit. |
| Pfam | PF00230. MIP. 1 hit. [Graphical view] |
| PRINTS | PR00783. MINTRINSICP. |
| SUPFAM | SSF81338. MIP. 1 hit. |
| TIGRFAMs | TIGR00861. MIP. 1 hit. |
| PROSITE | PS00221. MIP. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 16853. |
| PMAP-CutDB | P30301. |
| SOURCE | Search... |
Entry information
| Entry name | MIP_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P30301 Secondary accession number(s): Q17R41 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 12 Human chromosome 12: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with