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P30298

- SUS2_ORYSJ

UniProt

P30298 - SUS2_ORYSJ

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Protein

Sucrose synthase 2

Gene

SUS2

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli

Functioni

Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways.By similarity

Catalytic activityi

NDP-glucose + D-fructose = NDP + sucrose.

GO - Molecular functioni

  1. sucrose synthase activity Source: UniProtKB-EC

GO - Biological processi

  1. biosynthetic process Source: InterPro
  2. response to stress Source: UniProtKB-KW
  3. sucrose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Stress response

Protein family/group databases

CAZyiGT4. Glycosyltransferase Family 4.

Names & Taxonomyi

Protein namesi
Recommended name:
Sucrose synthase 2 (EC:2.4.1.13)
Short name:
OsSUS2
Alternative name(s):
Sucrose synthase 1
Short name:
RSs1
Sucrose-UDP glucosyltransferase 2
Gene namesi
Name:SUS2
Synonyms:RSS1, RSUS2
Ordered Locus Names:Os06g0194900, LOC_Os06g09450
ORF Names:P0648E08.22
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 6

Organism-specific databases

GrameneiP30298.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 808808Sucrose synthase 2PRO_0000204655Add
BLAST

Proteomic databases

PaxDbiP30298.
PRIDEiP30298.

Expressioni

Tissue specificityi

Predominantly expressed in the leaf tissues. Expressed in seeds, and at lower levels in roots. Expressed in leaf mesophyll and phloem (at protein level).2 Publications

Developmental stagei

Expressed early in seed development with a peak at 6 days after pollination (DAP) and then decreases slightly (at protein level). In the caryopse, slightly expressed during the pre-storage phase and was strongly expressed from the early to middle storage phase.3 Publications

Inductioni

By anaerobic stress. Up-regulated by sucrose, fructose and glucose and by sugar starvation. By submergence.2 Publications

Interactioni

Subunit structurei

Homotetramer or heterotetramer with SUS1.1 Publication

Protein-protein interaction databases

STRINGi39947.LOC_Os06g09450.2.

Structurei

3D structure databases

ProteinModelPortaliP30298.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni272 – 749478GT-B glycosyltransferaseBy similarityAdd
BLAST

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0438.
HOGENOMiHOG000240125.
InParanoidiP30298.
KOiK00695.
OMAiGKGMLQR.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR000368. Sucrose_synth.
IPR012820. Sucrose_synthase_pln/cyn.
[Graphical view]
PfamiPF00534. Glycos_transf_1. 1 hit.
PF00862. Sucrose_synth. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02470. sucr_synth. 1 hit.

Sequencei

Sequence statusi: Complete.

P30298-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAAKLARLHS LRERLGATFS SHPNELIALF SRYVNQGKGM LQRHQLLAEF
60 70 80 90 100
DALIEADKEK YAPFEDILRA AQEAIVLPPW VALAIRPRPG VWDYIRVNVS
110 120 130 140 150
ELAVEELSVS EYLAFKEQLV DGHTNSNFVL ELDFEPFNAS FPRPSMSKSI
160 170 180 190 200
GNGVQFLNRH LSSKLFQDKE SLYPLLNFLK AHNHKGTTMM LNDRIQSLRG
210 220 230 240 250
LQSSLRKAEE YLMGIPQDTP YSEFNHRFQE LGLEKGWGDC AKRVLDTIHL
260 270 280 290 300
LLDLLEAPDP ANLEKFLGTI PMMFNVVILS PHGYFAQSNV LGYPDTGGQV
310 320 330 340 350
VYILDQVRAL ENEMLLRIKQ QGLDITPKIL IVTRLLPDAV GTTCGQRVEK
360 370 380 390 400
VIGTEHTDIL RVPFRSENGI LRKWISRFDV WPFLETYTED VANEIMREMQ
410 420 430 440 450
AKPDLIIGNY SDGNLVATLL AHKLGVTQCT IAHALEKTKY PNSDIYLDKF
460 470 480 490 500
DSQYHFSCQF TADLIAMNHT DFIITSTFQE IAGSKDTVGQ YESHIAFTLP
510 520 530 540 550
GLYRVVHGID VFDPKFNIVS PGADMSVYFP YTEADKRLTA FHPEIEELLY
560 570 580 590 600
SEVENDEHKF VLKDKNKPII FSMARLDRVK NMTGLVEMYG KNAHLRDLAN
610 620 630 640 650
LVIVCGDHGN QSKDREEQAE FKKMYGLIDQ YKLKGHIRWI SAQMNRVRNG
660 670 680 690 700
ELYRYICDTK GVFVQPAFYE AFGLTVIEAM TCGLPTIATC HGGPAEIIVD
710 720 730 740 750
GVSGLHIDPY HSDKAADILV NFFEKCKQDS TYWDNISQGG LQRIYEKYTW
760 770 780 790 800
KLYSERLMTL TGVYGFWKYV SNLERRETRR YIEMFYALKY RSLASAVPLA

VDGESTSK
Length:808
Mass (Da):92,129
Last modified:June 27, 2006 - v2
Checksum:i93E24B2571EB1DAE
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti128 – 1281F → L in ABL74568. 1 PublicationCurated
Sequence conflicti191 – 1911L → P in CAA78747. 1 PublicationCurated
Sequence conflicti577 – 5771D → G in AEX32875. (PubMed:21533550)Curated
Sequence conflicti649 – 6524NGEL → TGEM in AEX32875. (PubMed:21533550)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L39940 Genomic DNA. Translation: AAL31375.1.
X64770 Genomic DNA. Translation: CAA46017.1.
Z15028 mRNA. Translation: CAA78747.1.
EF122480 mRNA. Translation: ABL74567.1.
EF122481 mRNA. Translation: ABL74568.1.
HQ895720 mRNA. Translation: AEX32875.1.
AP004280 Genomic DNA. Translation: BAD35646.1.
AP008212 Genomic DNA. Translation: BAF18961.1.
AK100546 mRNA. Translation: BAG94649.1.
PIRiS23543.
RefSeqiNP_001057047.1. NM_001063582.1.
UniGeneiOs.47050.

Genome annotation databases

EnsemblPlantsiOS06T0194900-01; OS06T0194900-01; OS06G0194900.
OS06T0194900-02; OS06T0194900-02; OS06G0194900.
OS06T0194900-03; OS06T0194900-03; OS06G0194900.
GeneIDi4340386.
KEGGiosa:4340386.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L39940 Genomic DNA. Translation: AAL31375.1 .
X64770 Genomic DNA. Translation: CAA46017.1 .
Z15028 mRNA. Translation: CAA78747.1 .
EF122480 mRNA. Translation: ABL74567.1 .
EF122481 mRNA. Translation: ABL74568.1 .
HQ895720 mRNA. Translation: AEX32875.1 .
AP004280 Genomic DNA. Translation: BAD35646.1 .
AP008212 Genomic DNA. Translation: BAF18961.1 .
AK100546 mRNA. Translation: BAG94649.1 .
PIRi S23543.
RefSeqi NP_001057047.1. NM_001063582.1.
UniGenei Os.47050.

3D structure databases

ProteinModelPortali P30298.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 39947.LOC_Os06g09450.2.

Protein family/group databases

CAZyi GT4. Glycosyltransferase Family 4.

Proteomic databases

PaxDbi P30298.
PRIDEi P30298.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS06T0194900-01 ; OS06T0194900-01 ; OS06G0194900 .
OS06T0194900-02 ; OS06T0194900-02 ; OS06G0194900 .
OS06T0194900-03 ; OS06T0194900-03 ; OS06G0194900 .
GeneIDi 4340386.
KEGGi osa:4340386.

Organism-specific databases

Gramenei P30298.

Phylogenomic databases

eggNOGi COG0438.
HOGENOMi HOG000240125.
InParanoidi P30298.
KOi K00695.
OMAi GKGMLQR.

Family and domain databases

InterProi IPR001296. Glyco_trans_1.
IPR000368. Sucrose_synth.
IPR012820. Sucrose_synthase_pln/cyn.
[Graphical view ]
Pfami PF00534. Glycos_transf_1. 1 hit.
PF00862. Sucrose_synth. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02470. sucr_synth. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A complete sequence of the rice sucrose synthase-1 (RSs1) gene."
    Wang M.-B., Boulter D., Gatehouse J.A.
    Plant Mol. Biol. 19:881-885(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: cv. Tainung 67.
    Tissue: Seed.
  2. "Complete structures of three rice sucrose synthase isogenes and differential regulation of their expressions."
    Huang J.W., Chen J.T., Yu W.P., Shyur L.F., Wang A.Y., Sung H.Y., Lee P.D., Su J.C.
    Biosci. Biotechnol. Biochem. 60:233-239(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: cv. Tainung 67.
    Tissue: Seed.
  3. "Isolation and sequence of a sucrose synthase cDNA from developing rice seeds."
    Odegard W., Liu J.J., de Lumen B.O.
    Plant Sci. 113:67-78(1996)
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. NATO.
    Tissue: Seed.
  4. "Molecular cloning of sucrose synthase 2 genes in rice seeds."
    Yoon U.H., Kim Y.H.
    Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Ilpoombyeo.
    Tissue: Seed.
  5. "Identification and characterization of the duplicate rice sucrose synthase genes OsSUS5 and OsSUS7 which are associated with the plasma membrane."
    Cho J.I., Kim H.B., Kim C.Y., Hahn T.R., Jeon J.S.
    Mol. Cells 31:553-561(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
    Strain: cv. Nipponbare.
  6. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  7. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  8. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  9. "Purification and characterization of sucrose synthase isozymes from etiolated rice seedlings."
    Huang D.Y., Wang A.-Y.
    Biochem. Mol. Biol. Int. 46:107-113(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBUNIT.
  10. "Differentially and developmentally regulated expression of three rice sucrose synthase genes."
    Wang A.-Y., Kao M.-H., Yang W.-H., Sayion Y., Liu L.-F., Lee P.-D., Su J.-C.
    Plant Cell Physiol. 40:800-807(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
  11. "Sugar-modulated gene expression of sucrose synthase in suspension-cultured cells of rice."
    Liao Y.-C., Wang A.-Y.
    Physiol. Plantarum 118:319-327(2003)
    Cited for: INDUCTION BY SUGARS.
  12. "Expression patterns of genes encoding carbohydrate-metabolizing enzymes and their relationship to grain filling in rice (Oryza sativa L.): comparison of caryopses located at different positions in a panicle."
    Ishimaru T., Hirose T., Matsuda T., Goto A., Takahashi K., Sasaki H., Terao T., Ishii R., Ohsugi R., Yamagishi T.
    Plant Cell Physiol. 46:620-628(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: DEVELOPMENTAL STAGE.
  13. "An expression analysis profile for the entire sucrose synthase gene family in rice."
    Hirose T., Scofield G.N., Terao T.
    Plant Sci. 174:534-543(2008)
    Cited for: GENE FAMILY, INDUCTION BY SUBMERGENCE.

Entry informationi

Entry nameiSUS2_ORYSJ
AccessioniPrimary (citable) accession number: P30298
Secondary accession number(s): A1YQI8
, H6TFZ1, Q0DDW2, Q53X21, Q69V32
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: June 27, 2006
Last modified: October 29, 2014
This is version 93 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3