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P30298

- SUS2_ORYSJ

UniProt

P30298 - SUS2_ORYSJ

Protein

Sucrose synthase 2

Gene

SUS2

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 92 (01 Oct 2014)
      Sequence version 2 (27 Jun 2006)
      Previous versions | rss
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    Functioni

    Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways.By similarity

    Catalytic activityi

    NDP-glucose + D-fructose = NDP + sucrose.

    GO - Molecular functioni

    1. sucrose synthase activity Source: UniProtKB-EC

    GO - Biological processi

    1. biosynthetic process Source: InterPro
    2. response to cadmium ion Source: EnsemblPlants/Gramene
    3. response to cold Source: EnsemblPlants/Gramene
    4. response to flooding Source: EnsemblPlants/Gramene
    5. response to glucose Source: EnsemblPlants/Gramene
    6. response to hypoxia Source: EnsemblPlants/Gramene
    7. response to mannitol Source: EnsemblPlants/Gramene
    8. response to osmotic stress Source: EnsemblPlants/Gramene
    9. response to sorbitol Source: EnsemblPlants/Gramene
    10. response to sucrose Source: EnsemblPlants/Gramene
    11. response to water deprivation Source: EnsemblPlants/Gramene
    12. sucrose metabolic process Source: InterPro

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Stress response

    Protein family/group databases

    CAZyiGT4. Glycosyltransferase Family 4.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Sucrose synthase 2 (EC:2.4.1.13)
    Short name:
    OsSUS2
    Alternative name(s):
    Sucrose synthase 1
    Short name:
    RSs1
    Sucrose-UDP glucosyltransferase 2
    Gene namesi
    Name:SUS2
    Synonyms:RSS1, RSUS2
    Ordered Locus Names:Os06g0194900, LOC_Os06g09450
    ORF Names:P0648E08.22
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 6

    Organism-specific databases

    GrameneiP30298.

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: EnsemblPlants/Gramene
    2. plasma membrane Source: EnsemblPlants/Gramene
    3. plasmodesma Source: EnsemblPlants/Gramene
    4. vacuole Source: EnsemblPlants/Gramene

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 808808Sucrose synthase 2PRO_0000204655Add
    BLAST

    Proteomic databases

    PaxDbiP30298.
    PRIDEiP30298.

    Expressioni

    Tissue specificityi

    Predominantly expressed in the leaf tissues. Expressed in seeds, and at lower levels in roots. Expressed in leaf mesophyll and phloem (at protein level).2 Publications

    Developmental stagei

    Expressed early in seed development with a peak at 6 days after pollination (DAP) and then decreases slightly (at protein level). In the caryopse, slightly expressed during the pre-storage phase and was strongly expressed from the early to middle storage phase.3 Publications

    Inductioni

    By anaerobic stress. Up-regulated by sucrose, fructose and glucose and by sugar starvation. By submergence.2 Publications

    Interactioni

    Subunit structurei

    Homotetramer or heterotetramer with SUS1.1 Publication

    Protein-protein interaction databases

    STRINGi39947.LOC_Os06g09450.2.

    Structurei

    3D structure databases

    ProteinModelPortaliP30298.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni272 – 749478GT-B glycosyltransferaseBy similarityAdd
    BLAST

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0438.
    HOGENOMiHOG000240125.
    KOiK00695.
    OMAiGKGMLQR.

    Family and domain databases

    InterProiIPR001296. Glyco_trans_1.
    IPR000368. Sucrose_synth.
    IPR012820. Sucrose_synthase_pln/cyn.
    [Graphical view]
    PfamiPF00534. Glycos_transf_1. 1 hit.
    PF00862. Sucrose_synth. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02470. sucr_synth. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P30298-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAAKLARLHS LRERLGATFS SHPNELIALF SRYVNQGKGM LQRHQLLAEF    50
    DALIEADKEK YAPFEDILRA AQEAIVLPPW VALAIRPRPG VWDYIRVNVS 100
    ELAVEELSVS EYLAFKEQLV DGHTNSNFVL ELDFEPFNAS FPRPSMSKSI 150
    GNGVQFLNRH LSSKLFQDKE SLYPLLNFLK AHNHKGTTMM LNDRIQSLRG 200
    LQSSLRKAEE YLMGIPQDTP YSEFNHRFQE LGLEKGWGDC AKRVLDTIHL 250
    LLDLLEAPDP ANLEKFLGTI PMMFNVVILS PHGYFAQSNV LGYPDTGGQV 300
    VYILDQVRAL ENEMLLRIKQ QGLDITPKIL IVTRLLPDAV GTTCGQRVEK 350
    VIGTEHTDIL RVPFRSENGI LRKWISRFDV WPFLETYTED VANEIMREMQ 400
    AKPDLIIGNY SDGNLVATLL AHKLGVTQCT IAHALEKTKY PNSDIYLDKF 450
    DSQYHFSCQF TADLIAMNHT DFIITSTFQE IAGSKDTVGQ YESHIAFTLP 500
    GLYRVVHGID VFDPKFNIVS PGADMSVYFP YTEADKRLTA FHPEIEELLY 550
    SEVENDEHKF VLKDKNKPII FSMARLDRVK NMTGLVEMYG KNAHLRDLAN 600
    LVIVCGDHGN QSKDREEQAE FKKMYGLIDQ YKLKGHIRWI SAQMNRVRNG 650
    ELYRYICDTK GVFVQPAFYE AFGLTVIEAM TCGLPTIATC HGGPAEIIVD 700
    GVSGLHIDPY HSDKAADILV NFFEKCKQDS TYWDNISQGG LQRIYEKYTW 750
    KLYSERLMTL TGVYGFWKYV SNLERRETRR YIEMFYALKY RSLASAVPLA 800
    VDGESTSK 808
    Length:808
    Mass (Da):92,129
    Last modified:June 27, 2006 - v2
    Checksum:i93E24B2571EB1DAE
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti128 – 1281F → L in ABL74568. 1 PublicationCurated
    Sequence conflicti191 – 1911L → P in CAA78747. 1 PublicationCurated
    Sequence conflicti577 – 5771D → G in AEX32875. (PubMed:21533550)Curated
    Sequence conflicti649 – 6524NGEL → TGEM in AEX32875. (PubMed:21533550)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L39940 Genomic DNA. Translation: AAL31375.1.
    X64770 Genomic DNA. Translation: CAA46017.1.
    Z15028 mRNA. Translation: CAA78747.1.
    EF122480 mRNA. Translation: ABL74567.1.
    EF122481 mRNA. Translation: ABL74568.1.
    HQ895720 mRNA. Translation: AEX32875.1.
    AP004280 Genomic DNA. Translation: BAD35646.1.
    AP008212 Genomic DNA. Translation: BAF18961.1.
    AK100546 mRNA. Translation: BAG94649.1.
    PIRiS23543.
    RefSeqiNP_001057047.1. NM_001063582.1.
    UniGeneiOs.47050.

    Genome annotation databases

    EnsemblPlantsiOS06T0194900-01; OS06T0194900-01; OS06G0194900.
    OS06T0194900-02; OS06T0194900-02; OS06G0194900.
    OS06T0194900-03; OS06T0194900-03; OS06G0194900.
    GeneIDi4340386.
    KEGGiosa:4340386.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L39940 Genomic DNA. Translation: AAL31375.1 .
    X64770 Genomic DNA. Translation: CAA46017.1 .
    Z15028 mRNA. Translation: CAA78747.1 .
    EF122480 mRNA. Translation: ABL74567.1 .
    EF122481 mRNA. Translation: ABL74568.1 .
    HQ895720 mRNA. Translation: AEX32875.1 .
    AP004280 Genomic DNA. Translation: BAD35646.1 .
    AP008212 Genomic DNA. Translation: BAF18961.1 .
    AK100546 mRNA. Translation: BAG94649.1 .
    PIRi S23543.
    RefSeqi NP_001057047.1. NM_001063582.1.
    UniGenei Os.47050.

    3D structure databases

    ProteinModelPortali P30298.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os06g09450.2.

    Protein family/group databases

    CAZyi GT4. Glycosyltransferase Family 4.

    Proteomic databases

    PaxDbi P30298.
    PRIDEi P30298.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS06T0194900-01 ; OS06T0194900-01 ; OS06G0194900 .
    OS06T0194900-02 ; OS06T0194900-02 ; OS06G0194900 .
    OS06T0194900-03 ; OS06T0194900-03 ; OS06G0194900 .
    GeneIDi 4340386.
    KEGGi osa:4340386.

    Organism-specific databases

    Gramenei P30298.

    Phylogenomic databases

    eggNOGi COG0438.
    HOGENOMi HOG000240125.
    KOi K00695.
    OMAi GKGMLQR.

    Family and domain databases

    InterProi IPR001296. Glyco_trans_1.
    IPR000368. Sucrose_synth.
    IPR012820. Sucrose_synthase_pln/cyn.
    [Graphical view ]
    Pfami PF00534. Glycos_transf_1. 1 hit.
    PF00862. Sucrose_synth. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02470. sucr_synth. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "A complete sequence of the rice sucrose synthase-1 (RSs1) gene."
      Wang M.-B., Boulter D., Gatehouse J.A.
      Plant Mol. Biol. 19:881-885(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: cv. Tainung 67.
      Tissue: Seed.
    2. "Complete structures of three rice sucrose synthase isogenes and differential regulation of their expressions."
      Huang J.W., Chen J.T., Yu W.P., Shyur L.F., Wang A.Y., Sung H.Y., Lee P.D., Su J.C.
      Biosci. Biotechnol. Biochem. 60:233-239(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: cv. Tainung 67.
      Tissue: Seed.
    3. "Isolation and sequence of a sucrose synthase cDNA from developing rice seeds."
      Odegard W., Liu J.J., de Lumen B.O.
      Plant Sci. 113:67-78(1996)
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. NATO.
      Tissue: Seed.
    4. "Molecular cloning of sucrose synthase 2 genes in rice seeds."
      Yoon U.H., Kim Y.H.
      Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Ilpoombyeo.
      Tissue: Seed.
    5. "Identification and characterization of the duplicate rice sucrose synthase genes OsSUS5 and OsSUS7 which are associated with the plasma membrane."
      Cho J.I., Kim H.B., Kim C.Y., Hahn T.R., Jeon J.S.
      Mol. Cells 31:553-561(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
      Strain: cv. Nipponbare.
    6. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    7. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    8. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    9. "Purification and characterization of sucrose synthase isozymes from etiolated rice seedlings."
      Huang D.Y., Wang A.-Y.
      Biochem. Mol. Biol. Int. 46:107-113(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: SUBUNIT.
    10. "Differentially and developmentally regulated expression of three rice sucrose synthase genes."
      Wang A.-Y., Kao M.-H., Yang W.-H., Sayion Y., Liu L.-F., Lee P.-D., Su J.-C.
      Plant Cell Physiol. 40:800-807(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
    11. "Sugar-modulated gene expression of sucrose synthase in suspension-cultured cells of rice."
      Liao Y.-C., Wang A.-Y.
      Physiol. Plantarum 118:319-327(2003)
      Cited for: INDUCTION BY SUGARS.
    12. "Expression patterns of genes encoding carbohydrate-metabolizing enzymes and their relationship to grain filling in rice (Oryza sativa L.): comparison of caryopses located at different positions in a panicle."
      Ishimaru T., Hirose T., Matsuda T., Goto A., Takahashi K., Sasaki H., Terao T., Ishii R., Ohsugi R., Yamagishi T.
      Plant Cell Physiol. 46:620-628(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: DEVELOPMENTAL STAGE.
    13. "An expression analysis profile for the entire sucrose synthase gene family in rice."
      Hirose T., Scofield G.N., Terao T.
      Plant Sci. 174:534-543(2008)
      Cited for: GENE FAMILY, INDUCTION BY SUBMERGENCE.

    Entry informationi

    Entry nameiSUS2_ORYSJ
    AccessioniPrimary (citable) accession number: P30298
    Secondary accession number(s): A1YQI8
    , H6TFZ1, Q0DDW2, Q53X21, Q69V32
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 1, 1993
    Last sequence update: June 27, 2006
    Last modified: October 1, 2014
    This is version 92 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3