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P30298

- SUS2_ORYSJ

UniProt

P30298 - SUS2_ORYSJ

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Protein
Sucrose synthase 2
Gene
SUS2, RSS1, RSUS2, Os06g0194900, LOC_Os06g09450, P0648E08.22
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways By similarity.

Catalytic activityi

NDP-glucose + D-fructose = NDP + sucrose.

GO - Molecular functioni

  1. sucrose synthase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. biosynthetic process Source: InterPro
  2. response to cadmium ion Source: EnsemblPlants/Gramene
  3. response to cold Source: EnsemblPlants/Gramene
  4. response to flooding Source: EnsemblPlants/Gramene
  5. response to glucose Source: EnsemblPlants/Gramene
  6. response to hypoxia Source: EnsemblPlants/Gramene
  7. response to mannitol Source: EnsemblPlants/Gramene
  8. response to osmotic stress Source: EnsemblPlants/Gramene
  9. response to sorbitol Source: EnsemblPlants/Gramene
  10. response to sucrose Source: EnsemblPlants/Gramene
  11. response to water deprivation Source: EnsemblPlants/Gramene
  12. sucrose metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Stress response

Protein family/group databases

CAZyiGT4. Glycosyltransferase Family 4.

Names & Taxonomyi

Protein namesi
Recommended name:
Sucrose synthase 2 (EC:2.4.1.13)
Short name:
OsSUS2
Alternative name(s):
Sucrose synthase 1
Short name:
RSs1
Sucrose-UDP glucosyltransferase 2
Gene namesi
Name:SUS2
Synonyms:RSS1, RSUS2
Ordered Locus Names:Os06g0194900, LOC_Os06g09450
ORF Names:P0648E08.22
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 6

Organism-specific databases

GrameneiP30298.

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: EnsemblPlants/Gramene
  2. plasma membrane Source: EnsemblPlants/Gramene
  3. plasmodesma Source: EnsemblPlants/Gramene
  4. vacuole Source: EnsemblPlants/Gramene
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 808808Sucrose synthase 2
PRO_0000204655Add
BLAST

Proteomic databases

PaxDbiP30298.
PRIDEiP30298.

Expressioni

Tissue specificityi

Predominantly expressed in the leaf tissues. Expressed in seeds, and at lower levels in roots. Expressed in leaf mesophyll and phloem (at protein level).2 Publications

Developmental stagei

Expressed early in seed development with a peak at 6 days after pollination (DAP) and then decreases slightly (at protein level). In the caryopse, slightly expressed during the pre-storage phase and was strongly expressed from the early to middle storage phase.3 Publications

Inductioni

By anaerobic stress. Up-regulated by sucrose, fructose and glucose and by sugar starvation. By submergence.2 Publications

Interactioni

Subunit structurei

Homotetramer or heterotetramer with SUS1.1 Publication

Protein-protein interaction databases

STRINGi39947.LOC_Os06g09450.2.

Structurei

3D structure databases

ProteinModelPortaliP30298.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni272 – 749478GT-B glycosyltransferase By similarity
Add
BLAST

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0438.
HOGENOMiHOG000240125.
KOiK00695.
OMAiGKGMLQR.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR000368. Sucrose_synth.
IPR012820. Sucrose_synthase_pln/cyn.
[Graphical view]
PfamiPF00534. Glycos_transf_1. 1 hit.
PF00862. Sucrose_synth. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02470. sucr_synth. 1 hit.

Sequencei

Sequence statusi: Complete.

P30298-1 [UniParc]FASTAAdd to Basket

« Hide

MAAKLARLHS LRERLGATFS SHPNELIALF SRYVNQGKGM LQRHQLLAEF    50
DALIEADKEK YAPFEDILRA AQEAIVLPPW VALAIRPRPG VWDYIRVNVS 100
ELAVEELSVS EYLAFKEQLV DGHTNSNFVL ELDFEPFNAS FPRPSMSKSI 150
GNGVQFLNRH LSSKLFQDKE SLYPLLNFLK AHNHKGTTMM LNDRIQSLRG 200
LQSSLRKAEE YLMGIPQDTP YSEFNHRFQE LGLEKGWGDC AKRVLDTIHL 250
LLDLLEAPDP ANLEKFLGTI PMMFNVVILS PHGYFAQSNV LGYPDTGGQV 300
VYILDQVRAL ENEMLLRIKQ QGLDITPKIL IVTRLLPDAV GTTCGQRVEK 350
VIGTEHTDIL RVPFRSENGI LRKWISRFDV WPFLETYTED VANEIMREMQ 400
AKPDLIIGNY SDGNLVATLL AHKLGVTQCT IAHALEKTKY PNSDIYLDKF 450
DSQYHFSCQF TADLIAMNHT DFIITSTFQE IAGSKDTVGQ YESHIAFTLP 500
GLYRVVHGID VFDPKFNIVS PGADMSVYFP YTEADKRLTA FHPEIEELLY 550
SEVENDEHKF VLKDKNKPII FSMARLDRVK NMTGLVEMYG KNAHLRDLAN 600
LVIVCGDHGN QSKDREEQAE FKKMYGLIDQ YKLKGHIRWI SAQMNRVRNG 650
ELYRYICDTK GVFVQPAFYE AFGLTVIEAM TCGLPTIATC HGGPAEIIVD 700
GVSGLHIDPY HSDKAADILV NFFEKCKQDS TYWDNISQGG LQRIYEKYTW 750
KLYSERLMTL TGVYGFWKYV SNLERRETRR YIEMFYALKY RSLASAVPLA 800
VDGESTSK 808
Length:808
Mass (Da):92,129
Last modified:June 27, 2006 - v2
Checksum:i93E24B2571EB1DAE
GO

Sequence conflict

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti128 – 1281F → L in ABL74568. 1 Publication
Sequence conflicti191 – 1911L → P in CAA78747. 1 Publication
Sequence conflicti577 – 5771D → G in AEX32875. 1 Publication
Sequence conflicti649 – 6524NGEL → TGEM in AEX32875. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L39940 Genomic DNA. Translation: AAL31375.1.
X64770 Genomic DNA. Translation: CAA46017.1.
Z15028 mRNA. Translation: CAA78747.1.
EF122480 mRNA. Translation: ABL74567.1.
EF122481 mRNA. Translation: ABL74568.1.
HQ895720 mRNA. Translation: AEX32875.1.
AP004280 Genomic DNA. Translation: BAD35646.1.
AP008212 Genomic DNA. Translation: BAF18961.1.
AK100546 mRNA. Translation: BAG94649.1.
PIRiS23543.
RefSeqiNP_001057047.1. NM_001063582.1.
UniGeneiOs.47050.

Genome annotation databases

EnsemblPlantsiOS06T0194900-01; OS06T0194900-01; OS06G0194900.
OS06T0194900-02; OS06T0194900-02; OS06G0194900.
OS06T0194900-03; OS06T0194900-03; OS06G0194900.
GeneIDi4340386.
KEGGiosa:4340386.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L39940 Genomic DNA. Translation: AAL31375.1 .
X64770 Genomic DNA. Translation: CAA46017.1 .
Z15028 mRNA. Translation: CAA78747.1 .
EF122480 mRNA. Translation: ABL74567.1 .
EF122481 mRNA. Translation: ABL74568.1 .
HQ895720 mRNA. Translation: AEX32875.1 .
AP004280 Genomic DNA. Translation: BAD35646.1 .
AP008212 Genomic DNA. Translation: BAF18961.1 .
AK100546 mRNA. Translation: BAG94649.1 .
PIRi S23543.
RefSeqi NP_001057047.1. NM_001063582.1.
UniGenei Os.47050.

3D structure databases

ProteinModelPortali P30298.
ModBasei Search...

Protein-protein interaction databases

STRINGi 39947.LOC_Os06g09450.2.

Protein family/group databases

CAZyi GT4. Glycosyltransferase Family 4.

Proteomic databases

PaxDbi P30298.
PRIDEi P30298.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS06T0194900-01 ; OS06T0194900-01 ; OS06G0194900 .
OS06T0194900-02 ; OS06T0194900-02 ; OS06G0194900 .
OS06T0194900-03 ; OS06T0194900-03 ; OS06G0194900 .
GeneIDi 4340386.
KEGGi osa:4340386.

Organism-specific databases

Gramenei P30298.

Phylogenomic databases

eggNOGi COG0438.
HOGENOMi HOG000240125.
KOi K00695.
OMAi GKGMLQR.

Family and domain databases

InterProi IPR001296. Glyco_trans_1.
IPR000368. Sucrose_synth.
IPR012820. Sucrose_synthase_pln/cyn.
[Graphical view ]
Pfami PF00534. Glycos_transf_1. 1 hit.
PF00862. Sucrose_synth. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02470. sucr_synth. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A complete sequence of the rice sucrose synthase-1 (RSs1) gene."
    Wang M.-B., Boulter D., Gatehouse J.A.
    Plant Mol. Biol. 19:881-885(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: cv. Tainung 67.
    Tissue: Seed.
  2. "Complete structures of three rice sucrose synthase isogenes and differential regulation of their expressions."
    Huang J.W., Chen J.T., Yu W.P., Shyur L.F., Wang A.Y., Sung H.Y., Lee P.D., Su J.C.
    Biosci. Biotechnol. Biochem. 60:233-239(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: cv. Tainung 67.
    Tissue: Seed.
  3. "Isolation and sequence of a sucrose synthase cDNA from developing rice seeds."
    Odegard W., Liu J.J., de Lumen B.O.
    Plant Sci. 113:67-78(1996)
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. NATO.
    Tissue: Seed.
  4. "Molecular cloning of sucrose synthase 2 genes in rice seeds."
    Yoon U.H., Kim Y.H.
    Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Ilpoombyeo.
    Tissue: Seed.
  5. "Identification and characterization of the duplicate rice sucrose synthase genes OsSUS5 and OsSUS7 which are associated with the plasma membrane."
    Cho J.I., Kim H.B., Kim C.Y., Hahn T.R., Jeon J.S.
    Mol. Cells 31:553-561(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
    Strain: cv. Nipponbare.
  6. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  7. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  8. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  9. "Purification and characterization of sucrose synthase isozymes from etiolated rice seedlings."
    Huang D.Y., Wang A.-Y.
    Biochem. Mol. Biol. Int. 46:107-113(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBUNIT.
  10. "Differentially and developmentally regulated expression of three rice sucrose synthase genes."
    Wang A.-Y., Kao M.-H., Yang W.-H., Sayion Y., Liu L.-F., Lee P.-D., Su J.-C.
    Plant Cell Physiol. 40:800-807(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY, DEVELOPMENTAL STAGE.
  11. "Sugar-modulated gene expression of sucrose synthase in suspension-cultured cells of rice."
    Liao Y.-C., Wang A.-Y.
    Physiol. Plantarum 118:319-327(2003)
    Cited for: INDUCTION BY SUGARS.
  12. "Expression patterns of genes encoding carbohydrate-metabolizing enzymes and their relationship to grain filling in rice (Oryza sativa L.): comparison of caryopses located at different positions in a panicle."
    Ishimaru T., Hirose T., Matsuda T., Goto A., Takahashi K., Sasaki H., Terao T., Ishii R., Ohsugi R., Yamagishi T.
    Plant Cell Physiol. 46:620-628(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: DEVELOPMENTAL STAGE.
  13. "An expression analysis profile for the entire sucrose synthase gene family in rice."
    Hirose T., Scofield G.N., Terao T.
    Plant Sci. 174:534-543(2008)
    Cited for: GENE FAMILY, INDUCTION BY SUBMERGENCE.

Entry informationi

Entry nameiSUS2_ORYSJ
AccessioniPrimary (citable) accession number: P30298
Secondary accession number(s): A1YQI8
, H6TFZ1, Q0DDW2, Q53X21, Q69V32
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: June 27, 2006
Last modified: September 3, 2014
This is version 91 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi