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Protein

Putative uncharacterized protein YchG

Gene

ychG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG11611-MONOMER.
EcoCyc:G6632-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YchG
Gene namesi
Name:ychG
Ordered Locus Names:b4573, JW1227/JW5883
ORF Names:b1239/b1240
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11611. ychG.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001688661 – 299Putative uncharacterized protein YchGAdd BLAST299

Interactioni

Protein-protein interaction databases

IntActiP30192. 5 interactors.

Structurei

3D structure databases

ProteinModelPortaliP30192.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000119822.
InParanoidiP30192.
OMAiRNIPVEW.
PhylomeDBiP30192.

Family and domain databases

InterProiIPR012337. RNaseH-like_dom.
IPR002559. Transposase_11.
IPR024473. Transposases_IS4_N.
[Graphical view]
PfamiPF01609. DDE_Tnp_1. 1 hit.
PF13006. Nterm_IS4. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.

Sequencei

Sequence statusi: Complete.

P30192-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLLNDLLDF SDHPLMPPPS AQLFAEHLPT EWIQHCLTLS AHATVRRRRL
60 70 80 90 100
PGDMVIWMVV QNEPITDVVR RLNLSADGEA GMNLLARSAV TQARQRVGAA
110 120 130 140 150
PVEWLFRQTA QDRGAERYLK DDWHGLQLFA IDGAQFRTPD KPELREYYGS
160 170 180 190 200
ANTSTKRQNA YPVMRLVALM NLGSHILLNA VTAPYRQSET VLAHSMLATI
210 220 230 240 250
PDNSITLFDK LFYSEDLLLT LNQKGCNRHW LLPAWKNIAS EMIELGNTAS
260 270 280 290
PGTIPKRLEH LRGALEVVFI TKRPRPSRPR SVKISKTRYP VKHSAAPLK
Length:299
Mass (Da):33,808
Last modified:December 12, 2006 - v2
Checksum:iF166D6C61A2D45A1
GO

Sequence cautioni

The sequence AP009048 differs from that shown. Reason: Frameshift at positions 62 and 112.Curated
The sequence CAA47742 differs from that shown. Reason: Frameshift at positions 62 and 112.Curated
The sequence U00096 differs from that shown. Reason: Frameshift at positions 62 and 112.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X67326 Genomic DNA. Translation: CAA47742.1. Frameshift.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.
PIRiC64871.
I76912.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X67326 Genomic DNA. Translation: CAA47742.1. Frameshift.
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.
PIRiC64871.
I76912.

3D structure databases

ProteinModelPortaliP30192.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP30192. 5 interactors.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

EchoBASEiEB1568.
EcoGeneiEG11611. ychG.

Phylogenomic databases

HOGENOMiHOG000119822.
InParanoidiP30192.
OMAiRNIPVEW.
PhylomeDBiP30192.

Enzyme and pathway databases

BioCyciEcoCyc:EG11611-MONOMER.
EcoCyc:G6632-MONOMER.

Family and domain databases

InterProiIPR012337. RNaseH-like_dom.
IPR002559. Transposase_11.
IPR024473. Transposases_IS4_N.
[Graphical view]
PfamiPF01609. DDE_Tnp_1. 1 hit.
PF13006. Nterm_IS4. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYCHG_ECOLI
AccessioniPrimary (citable) accession number: P30192
Secondary accession number(s): P76024
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: December 12, 2006
Last modified: November 2, 2016
This is version 103 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.