P30177 (YBIB_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein YbiB

Gene names

Name:	ybiB
Ordered Locus Names:	b0800, JW0785

Organism

Escherichia coli (strain K12) [Reference proteome] [HAMAP]

Taxonomic identifier

83333 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli

Protein attributes

Sequence length	320 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the anthranilate phosphoribosyltransferase family.

Ontologies

Keywords
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome Direct protein sequencing Reference proteome
Gene Ontology (GO)
Molecular_function	transferase activity, transferring glycosyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 320	320	Uncharacterized protein YbiB		PRO_0000154530

Sequences

	Sequence		Length	Mass (Da)
	P30177 [UniParc]. Last modified April 1, 1993. Version 1. Checksum: 81B2A731E0C12390	FASTA	320	35,049
	10 20 30 40 50 60 MDYRKIIKEI GRGKNHARDL DRDTARGLYA HMLNGEVPDL ELGGVLIALR IKGEGEAEML 70 80 90 100 110 120 GFYEAMQNHT IKLTPPAGKP MPIVIPSYNG ARKQANLTPL LAILLHKLGF PVVVHGVSED 130 140 150 160 170 180 PTRVLTETIF ELMGITPTLH GGQAQAKLDE HQPVFMPVGA FCPPLEKQLA MRWRMGVRNS 190 200 210 220 230 240 AHTLAKLATP FAEGEALRLS SVSHPEYIGR VAKFFSDIGG RALLMHGTEG EVYANPQRCP 250 260 270 280 290 300 QINLIDREGM RVLYEKQDTA GSELLPQAKD PETTAQWIER CLAGSEPIPE SLKIQMACCL 310 320 VATGEAATIS DGLARVNQAF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Structural analysis of the rhlE gene of Escherichia coli." Ohmori H. Jpn. J. Genet. 69:1-12(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[2]	"A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map." Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K., Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S., Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K. , Mori H., Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G., Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M., Horiuchi T. DNA Res. 3:137-155(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[3]	"The complete genome sequence of Escherichia coli K-12." Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. Science 277:1453-1474(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / MG1655 / ATCC 47076.
[4]	"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110." Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T. Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[5]	"A role of RnlA in the RNase LS activity from Escherichia coli." Otsuka Y., Koga M., Iwamoto A., Yonesaki T. Genes Genet. Syst. 82:291-299(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PROTEIN SEQUENCE OF 1-9. Strain: K12.

Cross-references

Sequence databases
EMBL GenBank DDBJ	L02123 Genomic DNA. Translation: AAA53656.1. U00096 Genomic DNA. Translation: AAC73887.1. AP009048 Genomic DNA. Translation: BAA35466.1.
PIR	H64816.
RefSeq	NP_415321.1. NC_000913.2. YP_489073.1. NC_007779.1.
3D structure databases
ProteinModelPortal	P30177.
SMR	P30177. Positions 7-312.
ModBase	Search...
Protein-protein interaction databases
DIP	DIP-11425N.
IntAct	P30177. 10 interactions.
STRING	511145.b0800.
Proteomic databases
PaxDb	P30177.
PRIDE	P30177.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAC73887; AAC73887; b0800. BAA35466; BAA35466; BAA35466.
GeneID	12930971. 945424.
KEGG	ecj:Y75_p0773. eco:b0800.
PATRIC	32116803. VBIEscCol129921_0827.
Organism-specific databases
EchoBASE	EB1540.
EcoGene	EG11580. ybiB.
Phylogenomic databases
eggNOG	COG0547.
HOGENOM	HOG000264819.
OMA	IGRGPHG.
ProtClustDB	PRK08136.
Enzyme and pathway databases
BioCyc	EcoCyc:EG11580-MONOMER. ECOL316407:JW0785-MONOMER.
Gene expression databases
Genevestigator	P30177.
Family and domain databases
Gene3D	3.40.1030.10. 1 hit.
InterPro	IPR000312. Glycosyl_Trfase_fam3. IPR017459. Glycosyl_Trfase_fam3_N_dom. [Graphical view]
Pfam	PF02885. Glycos_trans_3N. 1 hit. [Graphical view]
SUPFAM	SSF47648. Glyco_trans_3. 1 hit. SSF52418. Glyco_trans_3. 1 hit.
ProtoNet	Search...

Entry information

Entry name

YBIB_ECOLI

Accession

Primary (citable) accession number: P30177

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 1, 1993
Last sequence update:	April 1, 1993
Last modified:	May 1, 2013
This is version 97 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program