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Protein

Uncharacterized transporter YaaJ

Gene

yaaJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Symport, Transport

Enzyme and pathway databases

BioCyciEcoCyc:YAAJ-MONOMER.
ECOL316407:JW0006-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized transporter YaaJ
Gene namesi
Name:yaaJ
Ordered Locus Names:b0007, JW0006
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318 Componenti: Chromosome UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11555. yaaJ.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei4 – 2421HelicalSequence AnalysisAdd
BLAST
Transmembranei81 – 10121HelicalSequence AnalysisAdd
BLAST
Transmembranei141 – 16121HelicalSequence AnalysisAdd
BLAST
Transmembranei174 – 19421HelicalSequence AnalysisAdd
BLAST
Transmembranei207 – 22721HelicalSequence AnalysisAdd
BLAST
Transmembranei233 – 25321HelicalSequence AnalysisAdd
BLAST
Transmembranei300 – 32021HelicalSequence AnalysisAdd
BLAST
Transmembranei351 – 37121HelicalSequence AnalysisAdd
BLAST
Transmembranei391 – 41121HelicalSequence AnalysisAdd
BLAST
Transmembranei414 – 43421HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 476476Uncharacterized transporter YaaJPRO_0000161566Add
BLAST

Proteomic databases

PRIDEiP30143.

Interactioni

Protein-protein interaction databases

STRINGi511145.b0007.

Structurei

3D structure databases

ProteinModelPortaliP30143.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1115.
HOGENOMiHOG000255107.
InParanoidiP30143.
KOiK03310.
OMAiCTEYAFG.
OrthoDBiEOG6D2KVD.
PhylomeDBiP30143.

Family and domain databases

InterProiIPR001463. Na/Ala_symport.
[Graphical view]
PANTHERiPTHR30330. PTHR30330. 1 hit.
PfamiPF01235. Na_Ala_symp. 1 hit.
[Graphical view]
PRINTSiPR00175. NAALASMPORT.
TIGRFAMsiTIGR00835. agcS. 1 hit.
PROSITEiPS00873. NA_ALANINE_SYMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P30143-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPDFFSFINS VLWGSVMIYL LFGAGCWFTF RTGFVQFRYI RQFGKSLKNS
60 70 80 90 100
IHPQPGGLTS FQSLCTSLAA RVGSGNLAGV ALAITAGGPG AVFWMWVAAF
110 120 130 140 150
IGMATSFAEC SLAQLYKERD VNGQFRGGPA WYMARGLGMR WMGVLFAVFL
160 170 180 190 200
LIAYGIIFSG VQANAVARAL SFSFDFPPLV TGIILAVFTL LAITRGLHGV
210 220 230 240 250
ARLMQGFVPL MAIIWVLTSL VICVMNIGQL PHVIWSIFES AFGWQEAAGG
260 270 280 290 300
AAGYTLSQAI TNGFQRSMFS NEAGMGSTPN AAAAAASWPP HPAAQGIVQM
310 320 330 340 350
IGIFIDTLVI CTASAMLILL AGNGTTYMPL EGIQLIQKAM RVLMGSWGAE
360 370 380 390 400
FVTLVVILFA FSSIVANYIY AENNLFFLRL NNPKAIWCLR ICTFATVIGG
410 420 430 440 450
TLLSLPLMWQ LADIIMACMA ITNLTAILLL SPVVHTIASD YLRQRKLGVR
460 470
PVFDPLRYPD IGRQLSPDAW DDVSQE
Length:476
Mass (Da):51,663
Last modified:July 1, 1993 - v1
Checksum:i2F6EB2E12E126E63
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73118.1.
AP009048 Genomic DNA. Translation: BAB96585.1.
PIRiG64720.
RefSeqiNP_414548.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC73118; AAC73118; b0007.
BAB96585; BAB96585; BAB96585.
GeneIDi944745.
KEGGiecj:Y75_p0007.
eco:b0007.
PATRICi32115109. VBIEscCol129921_0006.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC73118.1.
AP009048 Genomic DNA. Translation: BAB96585.1.
PIRiG64720.
RefSeqiNP_414548.1. NC_000913.3.

3D structure databases

ProteinModelPortaliP30143.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi511145.b0007.

Proteomic databases

PRIDEiP30143.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73118; AAC73118; b0007.
BAB96585; BAB96585; BAB96585.
GeneIDi944745.
KEGGiecj:Y75_p0007.
eco:b0007.
PATRICi32115109. VBIEscCol129921_0006.

Organism-specific databases

EchoBASEiEB1516.
EcoGeneiEG11555. yaaJ.

Phylogenomic databases

eggNOGiCOG1115.
HOGENOMiHOG000255107.
InParanoidiP30143.
KOiK03310.
OMAiCTEYAFG.
OrthoDBiEOG6D2KVD.
PhylomeDBiP30143.

Enzyme and pathway databases

BioCyciEcoCyc:YAAJ-MONOMER.
ECOL316407:JW0006-MONOMER.

Miscellaneous databases

PROiP30143.

Family and domain databases

InterProiIPR001463. Na/Ala_symport.
[Graphical view]
PANTHERiPTHR30330. PTHR30330. 1 hit.
PfamiPF01235. Na_Ala_symp. 1 hit.
[Graphical view]
PRINTSiPR00175. NAALASMPORT.
TIGRFAMsiTIGR00835. agcS. 1 hit.
PROSITEiPS00873. NA_ALANINE_SYMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region."
    Yura T., Mori H., Nagai H., Nagata T., Ishihama A., Fujita N., Isono K., Mizobuchi K., Nakata A.
    Nucleic Acids Res. 20:3305-3308(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYAAJ_ECOLI
AccessioniPrimary (citable) accession number: P30143
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 1993
Last sequence update: July 1, 1993
Last modified: June 24, 2015
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.