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P29961 (CCMC_RHOCB) Reviewed, UniProtKB/Swiss-Prot

Last modified July 9, 2014. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Heme exporter protein C
Alternative name(s):
Cytochrome c-type biogenesis protein HelC
Gene names
Name:helC
Synonyms:ccmC
Ordered Locus Names:RCAP_rcc01787
OrganismRhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) [Complete proteome] [HAMAP]
Taxonomic identifier272942 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter

Protein attributes

Sequence length242 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes.

Subcellular location

Cell inner membrane; Multi-pass membrane protein Probable.

Sequence similarities

Belongs to the CcmC/CycZ/HelC family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 242242Heme exporter protein C
PRO_0000201560

Regions

Transmembrane21 – 4121Helical; Potential
Transmembrane61 – 8121Helical; Potential
Transmembrane93 – 11321Helical; Potential
Transmembrane127 – 14721Helical; Potential
Transmembrane158 – 17821Helical; Potential
Transmembrane201 – 22121Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P29961 [UniParc].

Last modified April 1, 1993. Version 1.
Checksum: 2966C2BC5160A663

FASTA24227,196
        10         20         30         40         50         60 
MSIWEYANPV KFMQTSGRLL PWVVAATVLT LLPGLVWGFF FTPVAAEFGA TVKVIYVHVP 

        70         80         90        100        110        120 
AATLAINIWV MMLVASLIWL IRRHHVSALA AKAAAPIGMV MTLIALITGA FWGQPMWGTW 

       130        140        150        160        170        180 
WEWDPRLTSF LILFLFYLGY MALWEAIENP DTAADLTGVL CLVGSVFAVL SRYAAIFWNQ 

       190        200        210        220        230        240 
GLHQGSTLSL DKEEHIADVY WQPLVLSIAG FGMLFVALLL LRTRTEIRAR RLKALEQRER 


MA 

« Hide

References

« Hide 'large scale' references
[1]"Bacterial cytochromes c biogenesis."
Beckman D.L., Trawick D.R., Kranz R.G.
Genes Dev. 6:268-283(1992) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC BAA-309 / NBRC 16581 / SB1003.
[2]"Complete genome sequence of the photosynthetic purple nonsulfur bacterium Rhodobacter capsulatus SB 1003."
Strnad H., Lapidus A., Paces J., Ulbrich P., Vlcek C., Paces V., Haselkorn R.
J. Bacteriol. 192:3545-3546(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-309 / NBRC 16581 / SB1003.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X63462 Genomic DNA. Translation: CAA45063.1.
CP001312 Genomic DNA. Translation: ADE85532.1.
PIRS23665.
RefSeqYP_003577939.1. NC_014034.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein family/group databases

TCDB9.B.14.2.1. the putative heme handling protein (hhp) family.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE85532; ADE85532; RCAP_rcc01787.
GeneID9004610.
KEGGrcp:RCAP_rcc01787.
PATRIC35503720. VBIRhoCap134200_1818.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000274637.
KOK02195.
OMASILRMGG.

Enzyme and pathway databases

BioCycRCAP272942:GJIY-1812-MONOMER.

Family and domain databases

InterProIPR002541. Cyt_c_assembly.
IPR003557. Cyt_c_biogenesis_CcmC.
[Graphical view]
PfamPF01578. Cytochrom_C_asm. 1 hit.
[Graphical view]
PRINTSPR01386. CCMCBIOGNSIS.
TIGRFAMsTIGR01191. ccmC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameCCMC_RHOCB
AccessionPrimary (citable) accession number: P29961
Secondary accession number(s): D5AU93
Entry history
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: April 1, 1993
Last modified: July 9, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families