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Protein

Homeobox protein prospero

Gene

pros

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Required for proper neuronal differentiation of most or all neurons and their precursors in central and peripheral nervous systems, axonal outgrowth and pathfinding. Not required for the specification of neuronal identity. May regulate transcription by binding to DNA.4 Publications

GO - Molecular functioni

  • DNA binding Source: FlyBase
  • transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Source: FlyBase
  • transcription factor activity, sequence-specific DNA binding Source: UniProtKB

GO - Biological processi

  • asymmetric cell division Source: FlyBase
  • asymmetric neuroblast division Source: FlyBase
  • asymmetric neuroblast division resulting in ganglion mother cell formation Source: FlyBase
  • axon guidance Source: FlyBase
  • axonogenesis Source: FlyBase
  • axonogenesis involved in innervation Source: FlyBase
  • brain development Source: FlyBase
  • cardiac muscle cell differentiation Source: GO_Central
  • cell fate commitment Source: FlyBase
  • cell fate specification Source: FlyBase
  • central nervous system development Source: UniProtKB
  • compound eye cone cell fate commitment Source: FlyBase
  • courtship behavior Source: FlyBase
  • dendrite guidance Source: FlyBase
  • dendrite morphogenesis Source: FlyBase
  • eye photoreceptor cell differentiation Source: FlyBase
  • G1 to G0 transition Source: FlyBase
  • ganglion mother cell fate determination Source: FlyBase
  • glial cell differentiation Source: FlyBase
  • male courtship behavior Source: FlyBase
  • negative regulation of axonogenesis Source: FlyBase
  • negative regulation of cell proliferation Source: FlyBase
  • negative regulation of gene expression Source: FlyBase
  • negative regulation of neuroblast proliferation Source: FlyBase
  • negative regulation of transcription from RNA polymerase II promoter Source: FlyBase
  • nervous system development Source: FlyBase
  • neuroblast fate determination Source: FlyBase
  • neuroblast proliferation Source: FlyBase
  • peripheral nervous system development Source: UniProtKB
  • phagocytosis Source: FlyBase
  • positive regulation of gene expression Source: FlyBase
  • positive regulation of transcription from RNA polymerase II promoter Source: GO_Central
  • protein localization Source: FlyBase
  • R7 cell fate commitment Source: FlyBase
  • regulation of neuron differentiation Source: UniProtKB
  • regulation of protein localization to nucleus Source: FlyBase
  • regulation of R7 cell differentiation Source: FlyBase
  • regulation of retinal cone cell fate specification Source: FlyBase
  • regulation of transcription, DNA-templated Source: FlyBase
  • sensory organ development Source: FlyBase
  • sensory perception of taste Source: FlyBase
  • synapse assembly Source: FlyBase
  • transcription, DNA-templated Source: UniProtKB-KW
  • ventral cord development Source: FlyBase
Complete GO annotation...

Keywords - Molecular functioni

Developmental protein

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Homeobox protein prospero
Gene namesi
Name:pros
ORF Names:CG17228
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 3R

Organism-specific databases

FlyBaseiFBgn0004595. pros.

Subcellular locationi

GO - Cellular componenti

  • apical cortex Source: FlyBase
  • basal cortex Source: FlyBase
  • basal part of cell Source: FlyBase
  • cell cortex Source: FlyBase
  • microtubule associated complex Source: FlyBase
  • nucleus Source: UniProtKB
  • plasma membrane Source: FlyBase
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Disruption phenotypei

Aberrant expression of the homeobox genes fushi tarazu, even-skipped and engrailed in a subset of neuroblast progeny.2 Publications

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002088841 – 1703Homeobox protein prosperoAdd BLAST1703

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei479Phosphoserine1 Publication1
Modified residuei482Phosphoserine1 Publication1
Modified residuei485Phosphoserine1 Publication1
Modified residuei497Phosphoserine1 Publication1
Modified residuei651Phosphoserine1 Publication1
Modified residuei654Phosphoserine1 Publication1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiP29617.
PRIDEiP29617.

PTM databases

iPTMnetiP29617.

Expressioni

Tissue specificityi

Expressed in embryonic neuronal precursors. Expressed in the developing CNS, lens-secreting cone cells of the eye, and midgut.3 Publications

Developmental stagei

Expressed during embryogenesis.1 Publication

Gene expression databases

BgeeiFBgn0004595.
ExpressionAtlasiP29617. baseline.
GenevisibleiP29617. DM.

Interactioni

Protein-protein interaction databases

BioGridi66496. 9 interactors.
IntActiP29617. 3 interactors.
MINTiMINT-851493.
STRINGi7227.FBpp0293146.

Structurei

Secondary structure

11703
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi1550 – 1559Combined sources10
Turni1560 – 1562Combined sources3
Helixi1568 – 1574Combined sources7
Helixi1582 – 1612Combined sources31
Helixi1628 – 1637Combined sources10
Helixi1647 – 1665Combined sources19
Helixi1668 – 1670Combined sources3
Turni1672 – 1675Combined sources4
Helixi1676 – 1683Combined sources8
Helixi1691 – 1694Combined sources4
Helixi1696 – 1699Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1MIJX-ray2.05A1545-1696[»]
1XPXX-ray2.80A1541-1703[»]
ProteinModelPortaliP29617.
SMRiP29617.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP29617.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1545 – 1603Prospero-type homeoPROSITE-ProRule annotationAdd BLAST59
Domaini1604 – 1703ProsperoPROSITE-ProRule annotationAdd BLAST100

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni1545 – 1703Homeo-ProsperoPROSITE-ProRule annotationAdd BLAST159

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi1291 – 1298Nuclear localization signal8

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi516 – 564Gln-richAdd BLAST49
Compositional biasi570 – 586Asn-richAdd BLAST17
Compositional biasi618 – 654Ser-richAdd BLAST37
Compositional biasi1000 – 1348Gln-richAdd BLAST349
Compositional biasi1427 – 1437His-richAdd BLAST11

Domaini

The Prospero-type homeodomain and the adjacent Prospero domain act as a single structural unit, the Homeo-Prospero domain.PROSITE-ProRule annotation2 Publications

Sequence similaritiesi

Belongs to the Prospero homeodomain family.PROSITE-ProRule annotation
Contains 1 Prospero domain.PROSITE-ProRule annotation
Contains 1 Prospero-type homeo domain.PROSITE-ProRule annotation

Keywords - Domaini

Homeobox

Phylogenomic databases

eggNOGiKOG3779. Eukaryota.
ENOG410ZE21. LUCA.
GeneTreeiENSGT00530000063507.
InParanoidiP29617.
KOiK20211.
OMAiPQQHAME.
OrthoDBiEOG091G0GHY.

Family and domain databases

Gene3Di1.10.10.500. 1 hit.
InterProiIPR023082. Homeo_prospero_dom.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF05044. HPD. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS51818. HOMEO_PROSPERO. 1 hit.
[Graphical view]

Sequences (3)i

Sequence statusi: Complete.

This entry describes 3 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform F (identifier: P29617-1) [UniParc]FASTAAdd to basket
Also known as: L

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MMSSEEYEAD CFGLYSDENN VLLKANEPET TAATKQQHQP QFQQQQQQQQ
60 70 80 90 100
QQQQHHHQHQ QPPPSSNGHT SPIPSQVNGD GSAANCGESG KTNTNTGSHS
110 120 130 140 150
HSNSGNTNTD ADKEQEREKA KEKANEEESE DSDDDVVVVL EGCEGNASSS
160 170 180 190 200
SSSSNSNSNA SSNNHKAAAT TTTTATTANH CNRSGGSSRS HRSARSSRQI
210 220 230 240 250
SQSTAVGKTT TCAAKKPTAA QATTTTAKNS NSNSNVNVNV NVNSNGSGNG
260 270 280 290 300
NANSKVNRRS RQRSLSKDIN NQPASSNSNS NSSNNSSNSN GGATATAAGF
310 320 330 340 350
MSSAAAAAAG AAGGGALFQP QSVSTANSSS SNNNNSSTPA ALATHSPTSN
360 370 380 390 400
SPVSGASSAS SLLTAAFGNL FGGSSAKMLN ELFGRQMKQA QDATSGLPQS
410 420 430 440 450
LDNAMLAAAM ETATSAELLI GSLNSTSKLL QQQHNNNSIA PANSTPMSNG
460 470 480 490 500
TNASISPGSA HSSSHSHQGV SPKGSRRVSA CSDRSLEAAA ADVAGGSPPR
510 520 530 540 550
AASVSSLNGG ASSGEQHQSQ LQHDLVAHHM LRNILQGKKE LMQLDQELRT
560 570 580 590 600
AMQQQQQQLQ EKEQLHSKLN NNNNNNIAAT ANNNNNTTME SINLIDDSEM
610 620 630 640 650
ADIKIKSEPQ TAPQPQQSPH GSSHSSRSGS GSGSHSSMAS DGSLRRKSSD
660 670 680 690 700
SLDSHGAQDD AQDEEDAAPT GQRSESRAPE EPQLPTKKES VDDMLDEVEL
710 720 730 740 750
LGLHSRGSDM DSLASPSHSD MMLLDKDDVL DEDDDDDCVE QKTSGSGCLK
760 770 780 790 800
KPGMDLKRAR VENIVSGMRC SPSSGLAQAG QLQVNGCKKR KLYQPQQHAM
810 820 830 840 850
ERYVAAAAGL NFGLNLQSMM LDQEDSESNE LESPQIQQKR VEKNALKSQL
860 870 880 890 900
RSMQEQLAEM QQKYVQLCSR MEQESECQEL DQDQDVEQEQ EPDNGSSDHI
910 920 930 940 950
ELSPSPTLTG DGDVSPNHKE ETGQERPGSS SPSPSPLKPK TSLGESSDSG
960 970 980 990 1000
ANMLSQMMSK MMSGKLHNPL VGVGHPALPQ GFPPLLQHMG DMSHAAAMYQ
1010 1020 1030 1040 1050
QFFFEQEARM AKEAAEQQQQ QQQQQQQQQQ QQQQEQQRRF EQEQQEQQRR
1060 1070 1080 1090 1100
KEEQQQQIQR QQQHLQQLQQ QQMEQQHVAT AAPRPQMHHP APARLPTRMG
1110 1120 1130 1140 1150
GAAGHTALKS ELSEKFQMLR ANNNSSMMRM SGTDLEGLAD VLKSEITTSL
1160 1170 1180 1190 1200
SALVDTIVTR FVHQRRLFSK QADSVTAAAE QLNKDLLLAS QILDRKSPRT
1210 1220 1230 1240 1250
KVADRPQNGP TPATQSAAAM FQAPKTPQGM NPVAAAALYN SMTGPFCLPP
1260 1270 1280 1290 1300
DQQQQQQTAQ QQQSAQQQQQ SSQQTQQQLE QNEALSLVVT PKKKRHKVTD
1310 1320 1330 1340 1350
TRITPRTVSR ILAQDGVVPP TGGPPSTPQQ QQQQQQQQQQ QQQQQQQQAS
1360 1370 1380 1390 1400
NGGNSNATPA QSPTRSSGGA AYHPQPPPPP PPMMPVSLPT SVAIPNPSLH
1410 1420 1430 1440 1450
ESKVFSPYSP FFNPHAAAGQ ATAAQLHQHH QQHHPHHQSM QLSSSPPGSL
1460 1470 1480 1490 1500
GALMDSRDSP PLPHPPSMLH PALLAAAHHG GSPDYKTCLR AVMDAQDRQS
1510 1520 1530 1540 1550
ECNSADMQFD GMAPTISFYK QMQLKTEHQE SLMAKHCESL TPLHSSTLTP
1560 1570 1580 1590 1600
MHLRKAKLMF FWVRYPSSAV LKMYFPDIKF NKNNTAQLVK WFSNFREFYY
1610 1620 1630 1640 1650
IQMEKYARQA VTEGIKTPDD LLIAGDSELY RVLNLHYNRN NHIEVPQNFR
1660 1670 1680 1690 1700
FVVESTLREF FRAIQGGKDT EQSWKKSIYK IISRMDDPVP EYFKSPNFLE

QLE
Length:1,703
Mass (Da):184,980
Last modified:March 24, 2009 - v3
Checksum:i35040F15C1CBB1D8
GO
Isoform E (identifier: P29617-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1216-1216: S → SGNNGSLLLA...PPPHIRPSPT
     1516-1544: Missing.

Note: No experimental confirmation available.
Show »
Length:1,835
Mass (Da):198,422
Checksum:i9C9F48EEEF8D2F3A
GO
Isoform G (identifier: P29617-4) [UniParc]FASTAAdd to basket
Also known as: S

The sequence of this isoform differs from the canonical sequence as follows:
     1516-1544: Missing.

Note: No experimental confirmation available.
Show »
Length:1,674
Mass (Da):181,539
Checksum:i7B55B08222C636A6
GO

Sequence cautioni

The sequence AAA28841 differs from that shown. Reason: Frameshift at positions 179 and 231.Curated
The sequence AAL28228 differs from that shown. Reason: Frameshift at position 1422.Curated
The sequence AAL28228 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated
The sequence AAT94492 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAA01464 differs from that shown. Reason: Erroneous initiation.Curated
The sequence CAA77802 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti49 – 57QQQQQQHHH → HHQ in AAA28841 (PubMed:1720353).Curated9
Sequence conflicti124 – 135ANEEE…DSDDD → RTKRSPRIPTTT in AAA28841 (PubMed:1720353).CuratedAdd BLAST12
Sequence conflicti175A → G in AAA28841 (PubMed:1720353).Curated1
Sequence conflicti230S → L in AAA28841 (PubMed:1720353).Curated1
Sequence conflicti283S → R in AAA28841 (PubMed:1720353).Curated1
Sequence conflicti293A → R in AAA28841 (PubMed:1720353).Curated1
Sequence conflicti376 – 398AKMLN…TSGLP → GQDAERAVWPPDEAGPGRNE WPA in AAA28841 (PubMed:1720353).CuratedAdd BLAST23
Sequence conflicti376 – 398AKMLN…TSGLP → GQDAERAVWPPDEAGPGRNE WPA in AAF05703 (PubMed:11051550).CuratedAdd BLAST23
Sequence conflicti420 – 444IGSLN…APANS → NLALQFHVQVAAAAAITTAL LPPIG in AAA28841 (PubMed:1720353).CuratedAdd BLAST25
Sequence conflicti420 – 444IGSLN…APANS → NLALQFHVQVAAAAAITTAL LPPIG in AAF05703 (PubMed:11051550).CuratedAdd BLAST25
Sequence conflicti718H → Q in BAA01464 (PubMed:1540176).Curated1
Sequence conflicti977A → C in AAA28841 (PubMed:1720353).Curated1
Sequence conflicti1102A → S in AAA28841 (PubMed:1720353).Curated1
Sequence conflicti1258T → S in AAA28841 (PubMed:1720353).Curated1
Sequence conflicti1348Q → QQQQQ in AAA28841 (PubMed:1720353).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_0023071216S → SGNNGSLLLANSQMPSQTTA SGSSAQQQQQQNAQQQHQGS QQQQQQNVVQQQNVAQQQHM QQQQQQQQSHPLLPPNCQQL ISAPRLNGSQLSFASPAAAA AAAMGLQMHHAAAAAAMSAQ QQQQQSGDPGANTNPNSGPA NPTNSSLSTLNIPPPHIRPS PT in isoform E. 1 Publication1
Alternative sequenceiVSP_0023081516 – 1544Missing in isoform E and isoform G. 2 PublicationsAdd BLAST29

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M81389 mRNA. Translation: AAA28841.1. Frameshift.
AE014297 Genomic DNA. Translation: AAF54628.3.
AE014297 Genomic DNA. Translation: AAN13500.3.
AE014297 Genomic DNA. Translation: AAN13501.3.
Z11743 mRNA. Translation: CAA77802.1. Different initiation.
D10609 mRNA. Translation: BAA01464.1. Different initiation.
BT015263 mRNA. Translation: AAT94492.1. Different initiation.
AF190403 Genomic DNA. Translation: AAF05703.1.
AY060680 mRNA. Translation: AAL28228.1. Sequence problems.
PIRiS24548.
RefSeqiNP_001247046.1. NM_001260117.2. [P29617-1]
NP_524317.4. NM_079593.6.
NP_731565.4. NM_169386.3.
NP_788636.3. NM_176459.4.
UniGeneiDm.7116.

Genome annotation databases

EnsemblMetazoaiFBtr0304608; FBpp0293150; FBgn0004595. [P29617-1]
GeneIDi41363.
KEGGidme:Dmel_CG17228.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M81389 mRNA. Translation: AAA28841.1. Frameshift.
AE014297 Genomic DNA. Translation: AAF54628.3.
AE014297 Genomic DNA. Translation: AAN13500.3.
AE014297 Genomic DNA. Translation: AAN13501.3.
Z11743 mRNA. Translation: CAA77802.1. Different initiation.
D10609 mRNA. Translation: BAA01464.1. Different initiation.
BT015263 mRNA. Translation: AAT94492.1. Different initiation.
AF190403 Genomic DNA. Translation: AAF05703.1.
AY060680 mRNA. Translation: AAL28228.1. Sequence problems.
PIRiS24548.
RefSeqiNP_001247046.1. NM_001260117.2. [P29617-1]
NP_524317.4. NM_079593.6.
NP_731565.4. NM_169386.3.
NP_788636.3. NM_176459.4.
UniGeneiDm.7116.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1MIJX-ray2.05A1545-1696[»]
1XPXX-ray2.80A1541-1703[»]
ProteinModelPortaliP29617.
SMRiP29617.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi66496. 9 interactors.
IntActiP29617. 3 interactors.
MINTiMINT-851493.
STRINGi7227.FBpp0293146.

PTM databases

iPTMnetiP29617.

Proteomic databases

PaxDbiP29617.
PRIDEiP29617.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0304608; FBpp0293150; FBgn0004595. [P29617-1]
GeneIDi41363.
KEGGidme:Dmel_CG17228.

Organism-specific databases

CTDi41363.
FlyBaseiFBgn0004595. pros.

Phylogenomic databases

eggNOGiKOG3779. Eukaryota.
ENOG410ZE21. LUCA.
GeneTreeiENSGT00530000063507.
InParanoidiP29617.
KOiK20211.
OMAiPQQHAME.
OrthoDBiEOG091G0GHY.

Miscellaneous databases

EvolutionaryTraceiP29617.
GenomeRNAii41363.
PROiP29617.

Gene expression databases

BgeeiFBgn0004595.
ExpressionAtlasiP29617. baseline.
GenevisibleiP29617. DM.

Family and domain databases

Gene3Di1.10.10.500. 1 hit.
InterProiIPR023082. Homeo_prospero_dom.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF05044. HPD. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS51818. HOMEO_PROSPERO. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiPROS_DROME
AccessioniPrimary (citable) accession number: P29617
Secondary accession number(s): Q6AWI5
, Q95SP0, Q9U6A2, Q9VGP8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 1, 1993
Last sequence update: March 24, 2009
Last modified: November 30, 2016
This is version 167 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.